G1723558


Basic Information

Item Value
gene id G1723558
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 28266593 ~ 28266992 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1974501
cccagtacctgccgctgaaaaacatctccacagcatgatgctgccactaccatgcttcaccgtagggatggtgccaggtttcctccagatgtgacgcttggcattcaggtcaaagagttcaatcttgatttcatcagaccagagaatcttgtttctcatggtttgagtccttcaggtgccttttggcaaactccaagcgggctgtcatgtgccttttattgaggagagCCTaatgtctggccactctaccgtaaaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtggactccaattaaggtgttgaaacatctcaaggataatcaatggaaacaggatgcgccaGAGCACAATATctagtctcatatcaaagggtttgaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1974501 True 400 lncRNA 0.46 1 28266593 28266992

Neighbor

gene id symbol gene type direction distance location
LOC118942914 NA coding upstream 8990 28254592 ~ 28257603 (+)
LOC110500182 LOC106609326 coding upstream 312156 27937819 ~ 27954437 (+)
LOC110500181 LOC106609325 coding upstream 343415 27905081 ~ 27923178 (+)
LOC110500180 LOC106609324 coding upstream 363696 27890465 ~ 27902897 (+)
LOC110500177 LOC106576158 coding upstream 580633 27656376 ~ 27685960 (+)
LOC110501048 LOC106609163 coding downstream 44026 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 coding downstream 74431 28341423 ~ 28343734 (+)
utp20 utp20 coding downstream 84959 28351951 ~ 28376045 (+)
LOC110500185 LOC106609173 coding downstream 112830 28379822 ~ 28390596 (+)
LOC110500191 LOC106609184 coding downstream 357770 28624762 ~ 28787436 (+)
G1722863 NA non-coding upstream 23096 28243290 ~ 28243497 (+)
G1722858 NA non-coding upstream 29994 28236384 ~ 28236599 (+)
G1722851 NA non-coding upstream 40913 28225460 ~ 28225680 (+)
G1722842 NA non-coding upstream 65857 28200506 ~ 28200736 (+)
G1723566 NA non-coding downstream 7379 28274371 ~ 28274634 (+)
G1723568 NA non-coding downstream 9320 28276312 ~ 28276674 (+)
G1723600 NA non-coding downstream 73191 28340183 ~ 28345660 (+)
G1723608 NA non-coding downstream 136960 28403952 ~ 28406128 (+)
G1723764 NA non-coding downstream 213048 28480040 ~ 28480313 (+)
G1722079 NA other upstream 1444658 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 1935500 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 2224750 26038302 ~ 26041843 (+)
G1720853 NA other upstream 2630004 25636335 ~ 25636589 (+)
G1720836 NA other upstream 2654325 25611816 ~ 25612268 (+)
G1724234 LOC106609199 other downstream 945827 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 991268 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 1623294 29890286 ~ 29891957 (+)

Expression


Co-expression Network