G1723838


Basic Information

Item Value
gene id G1723838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 28544612 ~ 28544931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1974845
acttcaactatgacagacaaaatgagggaaaaaaatccagaaatcacattgtaggatttttaatgaatttattttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgctgatgtaaGGAGGTTTtctcacgatacatggtcccattcattctttcctttatacggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcatgatgtttccaccctcatgcttcacagtaagtatggtgttctttggatgcaactcagcattctttgtcctccaaacacgacgagttgagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1974845 True 320 lncRNA 0.41 1 28544612 28544931

Neighbor

gene id symbol gene type direction distance location
LOC110500185 LOC106609173 coding upstream 154016 28379822 ~ 28390596 (+)
utp20 utp20 coding upstream 168567 28351951 ~ 28376045 (+)
LOC110500183 LOC106609180 coding upstream 201764 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 coding upstream 208688 28311018 ~ 28335924 (+)
LOC118942914 NA coding upstream 287009 28254592 ~ 28257603 (+)
LOC110500191 LOC106609184 coding downstream 79831 28624762 ~ 28787436 (+)
aebp2 LOC106609187 coding downstream 244001 28788932 ~ 28807707 (+)
LOC118943023 NA coding downstream 262889 28807820 ~ 28807949 (+)
LOC110501052 LOC106609188 coding downstream 319078 28864009 ~ 28940590 (+)
LOC118942915 NA coding downstream 396263 28941181 ~ 28943195 (+)
G1723791 NA non-coding upstream 23107 28521073 ~ 28521505 (+)
G1723790 NA non-coding upstream 23562 28520761 ~ 28521050 (+)
G1723765 NA non-coding upstream 60215 28480621 ~ 28484397 (+)
G1723764 NA non-coding upstream 64299 28480040 ~ 28480313 (+)
G1723608 NA non-coding upstream 138484 28403952 ~ 28406128 (+)
G1723905 NA non-coding downstream 47438 28592369 ~ 28592568 (+)
G1723926 NA non-coding downstream 62623 28607554 ~ 28607802 (+)
G1724040 NA non-coding downstream 279480 28824411 ~ 28827966 (+)
G1724086 NA non-coding downstream 348595 28893526 ~ 28893742 (+)
G1724096 NA non-coding downstream 364527 28909458 ~ 28909757 (+)
G1722079 NA other upstream 1722677 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2213519 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 2502769 26038302 ~ 26041843 (+)
G1724234 LOC106609199 other downstream 667888 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 713329 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 1345355 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 2037071 30582002 ~ 30590636 (+)
G1726222 NA other downstream 2060369 30605300 ~ 30611361 (+)

Expression


Co-expression Network