G1723926


Basic Information

Item Value
gene id G1723926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 28607554 ~ 28607802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1974933
AaacaacagagcaaactagaatgctatttggccctaaacagagagtacacagtggcagaatacctgatcactgtgactgacccaaacttaaggaaagctttgactatgtacagactcagtgagcatagctttgctattgagaaagacatggctctcaagagaagacaggctatatgAACACTGCCAAcagaatgaggtggaaactgagctgcaattCCTTACCTCCTGCTAAAtgaatgaccatattag

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1974933 True 249 lncRNA 0.42 1 28607554 28607802

Neighbor

gene id symbol gene type direction distance location
LOC110500185 LOC106609173 coding upstream 216958 28379822 ~ 28390596 (+)
utp20 utp20 coding upstream 231509 28351951 ~ 28376045 (+)
LOC110500183 LOC106609180 coding upstream 264706 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 coding upstream 271630 28311018 ~ 28335924 (+)
LOC118942914 NA coding upstream 349951 28254592 ~ 28257603 (+)
LOC110500191 LOC106609184 coding downstream 16960 28624762 ~ 28787436 (+)
aebp2 LOC106609187 coding downstream 181130 28788932 ~ 28807707 (+)
LOC118943023 NA coding downstream 200018 28807820 ~ 28807949 (+)
LOC110501052 LOC106609188 coding downstream 256207 28864009 ~ 28940590 (+)
LOC118942915 NA coding downstream 333392 28941181 ~ 28943195 (+)
G1723905 NA non-coding upstream 14986 28592369 ~ 28592568 (+)
G1723838 NA non-coding upstream 62623 28544612 ~ 28544931 (+)
G1723791 NA non-coding upstream 86049 28521073 ~ 28521505 (+)
G1723790 NA non-coding upstream 86504 28520761 ~ 28521050 (+)
G1723765 NA non-coding upstream 123157 28480621 ~ 28484397 (+)
G1724040 NA non-coding downstream 216609 28824411 ~ 28827966 (+)
G1724086 NA non-coding downstream 285724 28893526 ~ 28893742 (+)
G1724096 NA non-coding downstream 301656 28909458 ~ 28909757 (+)
G1724097 NA non-coding downstream 301972 28909774 ~ 28909986 (+)
G1724099 NA non-coding downstream 306259 28914061 ~ 28914279 (+)
G1722079 NA other upstream 1785619 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2276461 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 2565711 26038302 ~ 26041843 (+)
G1724234 LOC106609199 other downstream 605017 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 650458 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 1282484 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1974200 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1997498 30605300 ~ 30611361 (+)

Expression


Co-expression Network