Gene
RNA
| Item | Value |
|---|---|
| gene id | G1724086 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 28893526 ~ 28893742 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1975133 | True | 217 | lncRNA | 0.39 | 1 | 28893526 | 28893742 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943023 | NA | coding | upstream | 85577 | 28807820 ~ 28807949 (+) |
| aebp2 | LOC106609187 | coding | upstream | 85819 | 28788932 ~ 28807707 (+) |
| LOC110500191 | LOC106609184 | coding | upstream | 106090 | 28624762 ~ 28787436 (+) |
| LOC110500185 | LOC106609173 | coding | upstream | 502930 | 28379822 ~ 28390596 (+) |
| utp20 | utp20 | coding | upstream | 517481 | 28351951 ~ 28376045 (+) |
| LOC118942915 | NA | coding | downstream | 47452 | 28941181 ~ 28943195 (+) |
| LOC110501054 | LOC106609189 | coding | downstream | 83640 | 28977382 ~ 29040907 (+) |
| cog5 | LOC106609192 | coding | downstream | 186562 | 29080304 ~ 29168271 (+) |
| LOC110500199 | LOC106609197 | coding | downstream | 279857 | 29173599 ~ 29183951 (+) |
| LOC110500200 | LOC106609198 | coding | downstream | 295293 | 29189035 ~ 29194796 (+) |
| G1724040 | NA | non-coding | upstream | 65560 | 28824411 ~ 28827966 (+) |
| G1723926 | NA | non-coding | upstream | 285724 | 28607554 ~ 28607802 (+) |
| G1723905 | NA | non-coding | upstream | 300958 | 28592369 ~ 28592568 (+) |
| G1723838 | NA | non-coding | upstream | 348595 | 28544612 ~ 28544931 (+) |
| G1723791 | NA | non-coding | upstream | 372021 | 28521073 ~ 28521505 (+) |
| G1724096 | NA | non-coding | downstream | 15716 | 28909458 ~ 28909757 (+) |
| G1724097 | NA | non-coding | downstream | 16032 | 28909774 ~ 28909986 (+) |
| G1724099 | NA | non-coding | downstream | 20319 | 28914061 ~ 28914279 (+) |
| LOC110501052 | LOC106609188 | non-coding | downstream | 43005 | 28864009 ~ 28940590 (+) |
| LOC110500183 | LOC106609180 | other | upstream | 549792 | 28341423 ~ 28343734 (+) |
| LOC110501048 | LOC106609163 | other | upstream | 568909 | 28311018 ~ 28335924 (+) |
| G1722079 | NA | other | upstream | 2071591 | 26821647 ~ 26821935 (+) |
| cep83 | LOC106609290 | other | upstream | 2562433 | 26324744 ~ 26333964 (+) |
| G1721084 | pfkfb3 | other | upstream | 2851683 | 26038302 ~ 26041843 (+) |
| G1724234 | LOC106609199 | other | downstream | 319077 | 29209169 ~ 29214283 (+) |
| G1724262 | LOC106609200 | other | downstream | 364518 | 29256778 ~ 29259929 (+) |
| G1725312 | LOC106576088 | other | downstream | 996544 | 29890286 ~ 29891957 (+) |
| G1726209 | LOC106609221 | other | downstream | 1688260 | 30582002 ~ 30590636 (+) |
| G1726222 | NA | other | downstream | 1711558 | 30605300 ~ 30611361 (+) |
