G1724180


Basic Information

Item Value
gene id G1724180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29086006 ~ 29086320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975245
atgtatgtatatatatgtatgtatgtatatacatacatacatacatacatacatacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagggggaaaaaatccagaaaatcacattgtagcttttttaatgaatttatttgcaaattatgtgggaaaataagtttttggagggagttgaaagtccgtgttgcccatatatatatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975245 True 295 lncRNA 0.32 2 29086006 29086320

Neighbor

gene id symbol gene type direction distance location
LOC110501054 LOC106609189 coding upstream 45099 28977382 ~ 29040907 (+)
LOC118942915 NA coding upstream 142811 28941181 ~ 28943195 (+)
LOC110501052 LOC106609188 coding upstream 145416 28864009 ~ 28940590 (+)
LOC118943023 NA coding upstream 278057 28807820 ~ 28807949 (+)
aebp2 LOC106609187 coding upstream 278299 28788932 ~ 28807707 (+)
LOC110500199 LOC106609197 coding downstream 87279 29173599 ~ 29183951 (+)
LOC110500200 LOC106609198 coding downstream 102715 29189035 ~ 29194796 (+)
LOC110501056 LOC106576126 coding downstream 161597 29247917 ~ 29251909 (+)
LOC118942782 NA coding downstream 537962 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 894564 29980884 ~ 29993056 (+)
G1724119 NA non-coding upstream 133457 28952262 ~ 28952549 (+)
G1724115 NA non-coding upstream 140733 28944988 ~ 28945273 (+)
G1724099 NA non-coding upstream 171727 28914061 ~ 28914279 (+)
G1724222 NA non-coding downstream 100392 29186712 ~ 29186948 (+)
G1724227 NA non-coding downstream 112733 29199053 ~ 29199443 (+)
G1724229 NA non-coding downstream 114251 29200571 ~ 29200813 (+)
G1724231 LOC106609199 non-coding downstream 120542 29206862 ~ 29207187 (+)
G1724234 LOC106609199 non-coding downstream 122849 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 742272 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 761389 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2264071 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2754913 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 3044163 26038302 ~ 26041843 (+)
G1724262 LOC106609200 other downstream 171940 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 803966 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1495682 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1518980 30605300 ~ 30611361 (+)

Expression


Co-expression Network