G1724222


Basic Information

Item Value
gene id G1724222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29186712 ~ 29186948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975288
CTGCGGTGCAGTGTATGACCGGCCAGCTGTACGTTGattgtgtcgtcgttcagccacgactccgtgaagcacaaaatattacagttttgaatgtctcGTCGGAAGTTTAATCTTCCACGTAGGTCAtatattttattgtccaaagattgcacatttgctagcagaatggaaggaagtggaggtttattcaatcgcctacgaattctcagaaggcagcccaccCTCGGTCACCTTTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975288 True 237 lncRNA 0.46 1 29186712 29186948

Neighbor

gene id symbol gene type direction distance location
LOC110500199 LOC106609197 coding upstream 2761 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 18441 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 145805 28977382 ~ 29040907 (+)
LOC118942915 NA coding upstream 243517 28941181 ~ 28943195 (+)
LOC110501052 LOC106609188 coding upstream 246122 28864009 ~ 28940590 (+)
LOC110500200 LOC106609198 coding downstream 2087 29189035 ~ 29194796 (+)
LOC110501056 LOC106576126 coding downstream 60969 29247917 ~ 29251909 (+)
LOC118942782 NA coding downstream 437334 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 793936 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 806497 29993445 ~ 30002054 (+)
G1724180 NA non-coding upstream 100392 29086006 ~ 29086320 (+)
G1724119 NA non-coding upstream 234163 28952262 ~ 28952549 (+)
G1724115 NA non-coding upstream 241439 28944988 ~ 28945273 (+)
G1724227 NA non-coding downstream 12105 29199053 ~ 29199443 (+)
G1724229 NA non-coding downstream 13623 29200571 ~ 29200813 (+)
G1724231 LOC106609199 non-coding downstream 19914 29206862 ~ 29207187 (+)
G1724234 LOC106609199 non-coding downstream 22221 29209169 ~ 29214283 (+)
G1724246 NA non-coding downstream 44783 29231731 ~ 29232065 (+)
LOC110500183 LOC106609180 other upstream 842978 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 862095 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2364777 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2855619 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 3144869 26038302 ~ 26041843 (+)
G1724262 LOC106609200 other downstream 71312 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 703338 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1395054 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1418352 30605300 ~ 30611361 (+)

Expression


Co-expression Network