G1724227


Basic Information

Item Value
gene id G1724227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29199053 ~ 29199443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975293
gagtgaaggatgctttgttgcgaaataggaagccaattatagatttaactttggattggagacgtttgatgtgggtctggaaggagagtttacagtctaaccagacacctaggtatttgtagttgtccacgtattctaagtcagaaccgtccagagtagtgatgttggacaggcgggcaggtgcaggcagcgatcggttgaagagcatgcatttaggttgacttgtatttaagagcaaattgaggccacggaaggagagttgtatggcattgaagcttgcctagagggttgttaacacagtatccaaagaagggccagaagtatacagaatggtgtcgtctgcgtagaggtggatcagagactcaccagcagcaagagcgacatcattgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975293 True 391 lncRNA 0.46 1 29199053 29199443

Neighbor

gene id symbol gene type direction distance location
LOC110500200 LOC106609198 coding upstream 4257 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 15102 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 30782 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 158146 28977382 ~ 29040907 (+)
LOC118942915 NA coding upstream 255858 28941181 ~ 28943195 (+)
LOC110501056 LOC106576126 coding downstream 48474 29247917 ~ 29251909 (+)
LOC118942782 NA coding downstream 424839 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 781441 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 794002 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 802961 30002404 ~ 30009586 (+)
G1724222 NA non-coding upstream 12105 29186712 ~ 29186948 (+)
G1724180 NA non-coding upstream 112733 29086006 ~ 29086320 (+)
G1724119 NA non-coding upstream 246504 28952262 ~ 28952549 (+)
G1724115 NA non-coding upstream 253780 28944988 ~ 28945273 (+)
G1724229 NA non-coding downstream 1128 29200571 ~ 29200813 (+)
G1724231 LOC106609199 non-coding downstream 7419 29206862 ~ 29207187 (+)
G1724234 LOC106609199 non-coding downstream 9726 29209169 ~ 29214283 (+)
G1724246 NA non-coding downstream 32288 29231731 ~ 29232065 (+)
G1724252 NA non-coding downstream 45779 29245222 ~ 29245504 (+)
LOC110500183 LOC106609180 other upstream 855319 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 874436 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2377118 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2867960 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 3157210 26038302 ~ 26041843 (+)
G1724262 LOC106609200 other downstream 58817 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 690843 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1382559 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1405857 30605300 ~ 30611361 (+)

Expression


Co-expression Network