G1724229


Basic Information

Item Value
gene id G1724229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29200571 ~ 29200813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975295
ggttaggaagccatttttttaaataaccaggcatcctctactgacgggatgagatcaatatccttccaggataccccggccaggtcgattagaaaggcctgctcgctgaagtgtttcagggagcgtttgacagtgatgagtggaggtcgtttgaccgctgacccattacggatgcaggcaatgaggcagtgatcttggttgaagacagcagaggtgtatttagagcgcaagttggttaggatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975295 True 243 lncRNA 0.49 1 29200571 29200813

Neighbor

gene id symbol gene type direction distance location
LOC110500200 LOC106609198 coding upstream 5775 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 16620 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 32300 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 159664 28977382 ~ 29040907 (+)
LOC118942915 NA coding upstream 257376 28941181 ~ 28943195 (+)
LOC110501056 LOC106576126 coding downstream 47104 29247917 ~ 29251909 (+)
LOC118942782 NA coding downstream 423469 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 780071 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 792632 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 801591 30002404 ~ 30009586 (+)
G1724227 NA non-coding upstream 1128 29199053 ~ 29199443 (+)
G1724222 NA non-coding upstream 13623 29186712 ~ 29186948 (+)
G1724180 NA non-coding upstream 114251 29086006 ~ 29086320 (+)
G1724119 NA non-coding upstream 248022 28952262 ~ 28952549 (+)
G1724115 NA non-coding upstream 255298 28944988 ~ 28945273 (+)
G1724231 LOC106609199 non-coding downstream 6049 29206862 ~ 29207187 (+)
G1724234 LOC106609199 non-coding downstream 8356 29209169 ~ 29214283 (+)
G1724246 NA non-coding downstream 30918 29231731 ~ 29232065 (+)
G1724252 NA non-coding downstream 44409 29245222 ~ 29245504 (+)
G1724255 NA non-coding downstream 46037 29246850 ~ 29247065 (+)
LOC110500183 LOC106609180 other upstream 856837 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 875954 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2378636 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2869478 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 3158728 26038302 ~ 26041843 (+)
G1724262 LOC106609200 other downstream 57447 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 689473 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1381189 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1404487 30605300 ~ 30611361 (+)

Expression


Co-expression Network