G1724246


Basic Information

Item Value
gene id G1724246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29231731 ~ 29232065 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975314
gaaccattcttgatacacatgggaaactgttgagtgtgaaaaacccagcagcgttgcagatcttgacacaaaccggtgcgcatggcacctactaccatacccagttcaaaggcacttaacatGTTTtgcttgcccattcaccctctgaatggcacacatacacaatcaatgtctcaattgaTTTCTTACAAATCCTTCTTGCCTGTCTTCTTCCCTTCATTTACaccgaagtggatttaacaagtgaaatcaataacggatcataactttcacctggccaatctatgtcaaggaaagagcaggtgttattcatgttttgtatactcagagtATAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975314 True 335 lncRNA 0.41 1 29231731 29232065

Neighbor

gene id symbol gene type direction distance location
LOC110500200 LOC106609198 coding upstream 36935 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 47780 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 63460 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 190824 28977382 ~ 29040907 (+)
LOC118942915 NA coding upstream 288536 28941181 ~ 28943195 (+)
LOC110501056 LOC106576126 coding downstream 15852 29247917 ~ 29251909 (+)
LOC118942782 NA coding downstream 392217 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 748819 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 761380 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 770339 30002404 ~ 30009586 (+)
G1724234 LOC106609199 non-coding upstream 17448 29209169 ~ 29214283 (+)
G1724231 LOC106609199 non-coding upstream 24544 29206862 ~ 29207187 (+)
G1724229 NA non-coding upstream 30918 29200571 ~ 29200813 (+)
G1724227 NA non-coding upstream 32288 29199053 ~ 29199443 (+)
G1724222 NA non-coding upstream 44783 29186712 ~ 29186948 (+)
G1724252 NA non-coding downstream 13157 29245222 ~ 29245504 (+)
G1724255 NA non-coding downstream 14785 29246850 ~ 29247065 (+)
G1724260 NA non-coding downstream 20426 29252491 ~ 29252829 (+)
G1724261 NA non-coding downstream 21274 29253339 ~ 29254834 (+)
LOC110500183 LOC106609180 other upstream 887997 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 907114 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2409796 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2900638 26324744 ~ 26333964 (+)
G1724262 LOC106609200 other downstream 26195 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 658221 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1349937 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1373235 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1649778 30881776 ~ 30889293 (+)

Expression


Co-expression Network