Gene
RNA
| Item | Value |
|---|---|
| gene id | G1724252 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 29245222 ~ 29245504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1975320 | True | 283 | lncRNA | 0.32 | 1 | 29245222 | 29245504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500200 | LOC106609198 | coding | upstream | 50426 | 29189035 ~ 29194796 (+) |
| LOC110500199 | LOC106609197 | coding | upstream | 61271 | 29173599 ~ 29183951 (+) |
| cog5 | LOC106609192 | coding | upstream | 76951 | 29080304 ~ 29168271 (+) |
| LOC110501054 | LOC106609189 | coding | upstream | 204315 | 28977382 ~ 29040907 (+) |
| LOC118942915 | NA | coding | upstream | 302027 | 28941181 ~ 28943195 (+) |
| LOC110501056 | LOC106576126 | coding | downstream | 2413 | 29247917 ~ 29251909 (+) |
| LOC118942782 | NA | coding | downstream | 378778 | 29624282 ~ 29630010 (+) |
| LOC110500208 | LOC106609208 | coding | downstream | 735380 | 29980884 ~ 29993056 (+) |
| LOC110500209 | LOC106609209 | coding | downstream | 747941 | 29993445 ~ 30002054 (+) |
| LOC110500210 | LOC106609211 | coding | downstream | 756900 | 30002404 ~ 30009586 (+) |
| G1724246 | NA | non-coding | upstream | 13157 | 29231731 ~ 29232065 (+) |
| G1724234 | LOC106609199 | non-coding | upstream | 30939 | 29209169 ~ 29214283 (+) |
| G1724231 | LOC106609199 | non-coding | upstream | 38035 | 29206862 ~ 29207187 (+) |
| G1724229 | NA | non-coding | upstream | 44409 | 29200571 ~ 29200813 (+) |
| G1724227 | NA | non-coding | upstream | 45779 | 29199053 ~ 29199443 (+) |
| G1724255 | NA | non-coding | downstream | 1346 | 29246850 ~ 29247065 (+) |
| G1724260 | NA | non-coding | downstream | 6987 | 29252491 ~ 29252829 (+) |
| G1724261 | NA | non-coding | downstream | 7835 | 29253339 ~ 29254834 (+) |
| G1724262 | LOC106609200 | non-coding | downstream | 11274 | 29256778 ~ 29259929 (+) |
| LOC110500183 | LOC106609180 | other | upstream | 901488 | 28341423 ~ 28343734 (+) |
| LOC110501048 | LOC106609163 | other | upstream | 920605 | 28311018 ~ 28335924 (+) |
| G1722079 | NA | other | upstream | 2423287 | 26821647 ~ 26821935 (+) |
| cep83 | LOC106609290 | other | upstream | 2914129 | 26324744 ~ 26333964 (+) |
| G1725312 | LOC106576088 | other | downstream | 644782 | 29890286 ~ 29891957 (+) |
| G1726209 | LOC106609221 | other | downstream | 1336498 | 30582002 ~ 30590636 (+) |
| G1726222 | NA | other | downstream | 1359796 | 30605300 ~ 30611361 (+) |
| LOC110500226 | LOC106576059 | other | downstream | 1636339 | 30881776 ~ 30889293 (+) |
