G1724260


Basic Information

Item Value
gene id G1724260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29252491 ~ 29252829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975328
TTATTAAGCATTCAAGTAGATTACTGTAGACATTTGGCATTTAAGCGTTAGCCTGCTTTACTCTGTAGAGAATTACCTTGAATTTTAGCCAGACTTCTGAAGTTAGGCCCACAACCCTATTAAGAGTATGAGCGTGTGCGGGTGTTATAACTGGAAATAGAGAAGTGATACCTCAGAGAGCCAGGAGTGAAGCAGTTAACATCAACACTAAATGCTGTGTTAGTATCAGTGTTCTACTGTTGTAACAAATAGAGGAAGTCAGCGGGGAGATAATGAGTCCAGAAGGAGAAGTGAATGATGGGAGTCATCTGGCCAATTAGATAAGCCAGTGTTGTCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975328 True 339 lncRNA 0.41 1 29252491 29252829

Neighbor

gene id symbol gene type direction distance location
LOC110501056 LOC106576126 coding upstream 582 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 57695 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 68540 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 84220 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 211584 28977382 ~ 29040907 (+)
LOC118942782 NA coding downstream 371453 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 728055 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 740616 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 749575 30002404 ~ 30009586 (+)
cin cin coding downstream 820618 30073447 ~ 30075203 (+)
G1724255 NA non-coding upstream 5426 29246850 ~ 29247065 (+)
G1724252 NA non-coding upstream 6987 29245222 ~ 29245504 (+)
G1724246 NA non-coding upstream 20426 29231731 ~ 29232065 (+)
G1724234 LOC106609199 non-coding upstream 38208 29209169 ~ 29214283 (+)
G1724261 NA non-coding downstream 510 29253339 ~ 29254834 (+)
G1724262 LOC106609200 non-coding downstream 3949 29256778 ~ 29259929 (+)
G1724841 NA non-coding downstream 154831 29407660 ~ 29407860 (+)
G1724851 NA non-coding downstream 162242 29415071 ~ 29415398 (+)
G1724901 NA non-coding downstream 189007 29441836 ~ 29442042 (+)
LOC110500183 LOC106609180 other upstream 908757 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 927874 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2430556 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 2921398 26324744 ~ 26333964 (+)
G1725312 LOC106576088 other downstream 637457 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1329173 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1352471 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1629014 30881776 ~ 30889293 (+)

Expression


Co-expression Network