G1724841


Basic Information

Item Value
gene id G1724841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29407660 ~ 29407860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975959
tctatatgcttaattttatacacctgtcagcacttagtgtggctgaaatagccaaatccactaatttgaaggtgtgtccacatacagtaccagtcagaagtttggacacacctactcattcaagggttttctggtcttttactattgtctacattgtagaatactagtgaagacatcaaaactatgaaataacacatatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975959 True 201 lncRNA 0.36 1 29407660 29407860

Neighbor

gene id symbol gene type direction distance location
LOC110501056 LOC106576126 coding upstream 155751 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 212864 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 223709 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 239389 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 366753 28977382 ~ 29040907 (+)
LOC118942782 NA coding downstream 216422 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 573024 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 585585 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 594544 30002404 ~ 30009586 (+)
cin cin coding downstream 665587 30073447 ~ 30075203 (+)
G1724262 LOC106609200 non-coding upstream 147795 29256778 ~ 29259929 (+)
G1724261 NA non-coding upstream 152826 29253339 ~ 29254834 (+)
G1724260 NA non-coding upstream 154831 29252491 ~ 29252829 (+)
G1724255 NA non-coding upstream 160595 29246850 ~ 29247065 (+)
G1724851 NA non-coding downstream 7211 29415071 ~ 29415398 (+)
G1724901 NA non-coding downstream 33976 29441836 ~ 29442042 (+)
G1724904 NA non-coding downstream 36678 29444538 ~ 29444754 (+)
G1724921 NA non-coding downstream 46598 29454458 ~ 29455192 (+)
G1724923 NA non-coding downstream 48006 29455866 ~ 29456067 (+)
G1724234 LOC106609199 other upstream 193377 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1063926 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1083043 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2585725 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 482426 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1174142 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1197440 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1473983 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1732737 31140597 ~ 31141090 (+)

Expression


Co-expression Network