G1724851


Basic Information

Item Value
gene id G1724851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29415071 ~ 29415398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1975969
gatgttagcatgttccagagatttctgtaaatcTTAGCTgatctaggattcttcttaacctcattgagcattctcgtgcagtcatctttgcaggatggccactcctagggagagtagcaacagtgctgaactttctccatttatagacaatttgtcttactgtggactgatgaacatcaaggctttaaAGActcttttgtaaccctttccagttttatgcaagtcaacagttcttaatcttaggtcttctgagatctcttttgttcgaggcatggttcacatcaggcaatgcttgttgtgaatagcaaactcacagtgttttttatag

Function

NR:

description
uncharacterized protein LOC110951677 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1975969 True 328 lncRNA 0.40 1 29415071 29415398

Neighbor

gene id symbol gene type direction distance location
LOC110501056 LOC106576126 coding upstream 163162 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 220275 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 231120 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 246800 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 374164 28977382 ~ 29040907 (+)
LOC118942782 NA coding downstream 208884 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 565486 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 578047 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 587006 30002404 ~ 30009586 (+)
cin cin coding downstream 658049 30073447 ~ 30075203 (+)
G1724841 NA non-coding upstream 7211 29407660 ~ 29407860 (+)
G1724262 LOC106609200 non-coding upstream 155206 29256778 ~ 29259929 (+)
G1724261 NA non-coding upstream 160237 29253339 ~ 29254834 (+)
G1724260 NA non-coding upstream 162242 29252491 ~ 29252829 (+)
G1724901 NA non-coding downstream 26438 29441836 ~ 29442042 (+)
G1724904 NA non-coding downstream 29140 29444538 ~ 29444754 (+)
G1724921 NA non-coding downstream 39060 29454458 ~ 29455192 (+)
G1724923 NA non-coding downstream 40468 29455866 ~ 29456067 (+)
G1724941 NA non-coding downstream 51554 29466952 ~ 29467167 (+)
G1724234 LOC106609199 other upstream 200788 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1071337 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1090454 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2593136 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 474888 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1166604 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1189902 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1466445 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1725199 31140597 ~ 31141090 (+)

Expression


Co-expression Network