G1724901


Basic Information

Item Value
gene id G1724901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29441836 ~ 29442042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976019
ccttatgacgaccgtgacagaacaacccaccaaaaaaggaccaagcagcatgctAAAAAGGAGTTGACATCTCGGACCTGGGAGAAAgaagagtggaggacatcctggacctgggaggaggtaatggcaggggacaagaccctgccatggcaGCAGGTGGAGATAGCACAGGAGGAACGGCGTCGATATGAAGGTACACGGCtggca

Function

NR:

description
PREDICTED: protein SCAI-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976019 True 207 lncRNA 0.55 1 29441836 29442042

Neighbor

gene id symbol gene type direction distance location
LOC110501056 LOC106576126 coding upstream 189927 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 247040 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 257885 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 273565 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 400929 28977382 ~ 29040907 (+)
LOC118942782 NA coding downstream 182240 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 538842 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 551403 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 560362 30002404 ~ 30009586 (+)
cin cin coding downstream 631405 30073447 ~ 30075203 (+)
G1724851 NA non-coding upstream 26438 29415071 ~ 29415398 (+)
G1724841 NA non-coding upstream 33976 29407660 ~ 29407860 (+)
G1724262 LOC106609200 non-coding upstream 181971 29256778 ~ 29259929 (+)
G1724261 NA non-coding upstream 187002 29253339 ~ 29254834 (+)
G1724260 NA non-coding upstream 189007 29252491 ~ 29252829 (+)
G1724904 NA non-coding downstream 2496 29444538 ~ 29444754 (+)
G1724921 NA non-coding downstream 12416 29454458 ~ 29455192 (+)
G1724923 NA non-coding downstream 13824 29455866 ~ 29456067 (+)
G1724941 NA non-coding downstream 24910 29466952 ~ 29467167 (+)
G1724965 NA non-coding downstream 55776 29497818 ~ 29498899 (+)
G1724234 LOC106609199 other upstream 227553 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1098102 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1117219 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2619901 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 448244 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1139960 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1163258 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1439801 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1698555 31140597 ~ 31141090 (+)

Expression


Co-expression Network