Gene
RNA
| Item | Value |
|---|---|
| gene id | G1724904 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 29444538 ~ 29444754 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1976022 | True | 217 | lncRNA | 0.42 | 1 | 29444538 | 29444754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501056 | LOC106576126 | coding | upstream | 192629 | 29247917 ~ 29251909 (+) |
| LOC110500200 | LOC106609198 | coding | upstream | 249742 | 29189035 ~ 29194796 (+) |
| LOC110500199 | LOC106609197 | coding | upstream | 260587 | 29173599 ~ 29183951 (+) |
| cog5 | LOC106609192 | coding | upstream | 276267 | 29080304 ~ 29168271 (+) |
| LOC110501054 | LOC106609189 | coding | upstream | 403631 | 28977382 ~ 29040907 (+) |
| LOC118942782 | NA | coding | downstream | 179528 | 29624282 ~ 29630010 (+) |
| LOC110500208 | LOC106609208 | coding | downstream | 536130 | 29980884 ~ 29993056 (+) |
| LOC110500209 | LOC106609209 | coding | downstream | 548691 | 29993445 ~ 30002054 (+) |
| LOC110500210 | LOC106609211 | coding | downstream | 557650 | 30002404 ~ 30009586 (+) |
| cin | cin | coding | downstream | 628693 | 30073447 ~ 30075203 (+) |
| G1724901 | NA | non-coding | upstream | 2496 | 29441836 ~ 29442042 (+) |
| G1724851 | NA | non-coding | upstream | 29140 | 29415071 ~ 29415398 (+) |
| G1724841 | NA | non-coding | upstream | 36678 | 29407660 ~ 29407860 (+) |
| G1724262 | LOC106609200 | non-coding | upstream | 184673 | 29256778 ~ 29259929 (+) |
| G1724261 | NA | non-coding | upstream | 189704 | 29253339 ~ 29254834 (+) |
| G1724921 | NA | non-coding | downstream | 9704 | 29454458 ~ 29455192 (+) |
| G1724923 | NA | non-coding | downstream | 11112 | 29455866 ~ 29456067 (+) |
| G1724941 | NA | non-coding | downstream | 22198 | 29466952 ~ 29467167 (+) |
| G1724965 | NA | non-coding | downstream | 53064 | 29497818 ~ 29498899 (+) |
| G1725070 | NA | non-coding | downstream | 122892 | 29567646 ~ 29567856 (+) |
| G1724234 | LOC106609199 | other | upstream | 230255 | 29209169 ~ 29214283 (+) |
| LOC110500183 | LOC106609180 | other | upstream | 1100804 | 28341423 ~ 28343734 (+) |
| LOC110501048 | LOC106609163 | other | upstream | 1119921 | 28311018 ~ 28335924 (+) |
| G1722079 | NA | other | upstream | 2622603 | 26821647 ~ 26821935 (+) |
| G1725312 | LOC106576088 | other | downstream | 445532 | 29890286 ~ 29891957 (+) |
| G1726209 | LOC106609221 | other | downstream | 1137248 | 30582002 ~ 30590636 (+) |
| G1726222 | NA | other | downstream | 1160546 | 30605300 ~ 30611361 (+) |
| LOC110500226 | LOC106576059 | other | downstream | 1437089 | 30881776 ~ 30889293 (+) |
| G1726863 | NA | other | downstream | 1695843 | 31140597 ~ 31141090 (+) |
