G1724921


Basic Information

Item Value
gene id G1724921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29454458 ~ 29455192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976039
tggtgggagtgtcatggtctggggctgcatgagtgctgccggcactggggagctacagttcagtgagggaaccatgaatgccaacatgtactgtgacatactgaagcagagcatgatcccctcccttcggagactgggcccagggcagtattccaacatgataacgaccccaaacacacctccaagacgaccactgccttgctaaagaagctgaggataaaggtgatggactggccaagtctccagacctaaaccctattgagcatctgtggggcatcctcaaacggaaggtggaggagtgcaaggtctctaacatccaccagctccgtgatgtcgtcatggaggagtggaagaggactccagtggcaacctgtgaagctctggtgaactccatgcccaagagggttaaggcagtgctggaaaatgatggtggccacacaaaatattgacactttgggcccaatttggacattttcacttaggggtgtactcacttttgttgccagtggtttagacattaatggctgtgtgttgagttattttgaggggacagcaaatttacactgttatacaagctgtacactcactactttacattgtagcaaagtgtcatttcttcagtgttgtcacatgaaaagatatactcaaatatttacaaaaatgtgaggggtggactcacttttgtgatatactgtatatattttgcaGACAGTTTTGCAggatattgtattttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976039 True 735 lncRNA 0.46 1 29454458 29455192

Neighbor

gene id symbol gene type direction distance location
LOC110501056 LOC106576126 coding upstream 202549 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 259662 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 270507 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 286187 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 413551 28977382 ~ 29040907 (+)
LOC118942782 NA coding downstream 169090 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 525692 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 538253 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 547212 30002404 ~ 30009586 (+)
cin cin coding downstream 618255 30073447 ~ 30075203 (+)
G1724904 NA non-coding upstream 9704 29444538 ~ 29444754 (+)
G1724901 NA non-coding upstream 12416 29441836 ~ 29442042 (+)
G1724851 NA non-coding upstream 39060 29415071 ~ 29415398 (+)
G1724841 NA non-coding upstream 46598 29407660 ~ 29407860 (+)
G1724262 LOC106609200 non-coding upstream 194593 29256778 ~ 29259929 (+)
G1724923 NA non-coding downstream 674 29455866 ~ 29456067 (+)
G1724941 NA non-coding downstream 11760 29466952 ~ 29467167 (+)
G1724965 NA non-coding downstream 42626 29497818 ~ 29498899 (+)
G1725070 NA non-coding downstream 112454 29567646 ~ 29567856 (+)
G1725108 NA non-coding downstream 161324 29616516 ~ 29616716 (+)
G1724234 LOC106609199 other upstream 240175 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1110724 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1129841 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2632523 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 435094 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1126810 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1150108 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1426651 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1685405 31140597 ~ 31141090 (+)

Expression


Co-expression Network