G1724941


Basic Information

Item Value
gene id G1724941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29466952 ~ 29467167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976059
cctacaatgtggttatctggattttttttctcatgtcgtctgtcatagttgaagtgcacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattactggctgactaaatacttttttgccccactgtatatttaccAAAaacatatatgggggattggaaatgatgcagacaattacattgatggaagcaacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976059 True 216 lncRNA 0.37 1 29466952 29467167

Neighbor

gene id symbol gene type direction distance location
LOC110501056 LOC106576126 coding upstream 215043 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 272156 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 283001 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 298681 29080304 ~ 29168271 (+)
LOC110501054 LOC106609189 coding upstream 426045 28977382 ~ 29040907 (+)
LOC118942782 NA coding downstream 157115 29624282 ~ 29630010 (+)
LOC110500208 LOC106609208 coding downstream 513717 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 526278 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 535237 30002404 ~ 30009586 (+)
cin cin coding downstream 606280 30073447 ~ 30075203 (+)
G1724923 NA non-coding upstream 10885 29455866 ~ 29456067 (+)
G1724921 NA non-coding upstream 11760 29454458 ~ 29455192 (+)
G1724904 NA non-coding upstream 22198 29444538 ~ 29444754 (+)
G1724901 NA non-coding upstream 24910 29441836 ~ 29442042 (+)
G1724851 NA non-coding upstream 51554 29415071 ~ 29415398 (+)
G1724965 NA non-coding downstream 30651 29497818 ~ 29498899 (+)
G1725070 NA non-coding downstream 100479 29567646 ~ 29567856 (+)
G1725108 NA non-coding downstream 149349 29616516 ~ 29616716 (+)
G1725115 NA non-coding downstream 165068 29632235 ~ 29632464 (+)
G1725123 NA non-coding downstream 179386 29646553 ~ 29646781 (+)
G1724262 LOC106609200 other upstream 207023 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 252669 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1123218 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1142335 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2645017 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 423119 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 1114835 30582002 ~ 30590636 (+)
G1726222 NA other downstream 1138133 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1414676 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1673430 31140597 ~ 31141090 (+)

Expression


Co-expression Network