G1725115


Basic Information

Item Value
gene id G1725115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29632235 ~ 29632464 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976238
ttcaatgctagcatcagtaattctaaaTGTGGTGTTaccccagctagcatggacactgacagttctgaatctgatgcagccgaagagctactgcccccttactcGGGAAAGCAcggaacaacagacagggacgttggaccatcgaagaggagcaaatatgatgagaactacattgatttggggttcacttatattgggagtagtgcctttcctcagccacagtgtgttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976238 True 230 lncRNA 0.47 1 29632235 29632464

Neighbor

gene id symbol gene type direction distance location
LOC118942782 NA coding upstream 2225 29624282 ~ 29630010 (+)
LOC110501056 LOC106576126 coding upstream 380326 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 437439 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 448284 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 463964 29080304 ~ 29168271 (+)
LOC110500208 LOC106609208 coding downstream 348420 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 360981 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 369940 30002404 ~ 30009586 (+)
cin cin coding downstream 440983 30073447 ~ 30075203 (+)
LOC110501059 LOC106609213 coding downstream 466906 30099370 ~ 30113179 (+)
G1725108 NA non-coding upstream 15519 29616516 ~ 29616716 (+)
G1725070 NA non-coding upstream 64379 29567646 ~ 29567856 (+)
G1724965 NA non-coding upstream 133336 29497818 ~ 29498899 (+)
G1724941 NA non-coding upstream 165068 29466952 ~ 29467167 (+)
G1724923 NA non-coding upstream 176168 29455866 ~ 29456067 (+)
G1725123 NA non-coding downstream 14089 29646553 ~ 29646781 (+)
G1725187 NA non-coding downstream 21276 29653740 ~ 29654008 (+)
G1725306 NA non-coding downstream 250059 29882523 ~ 29882927 (+)
G1725307 NA non-coding downstream 252035 29884499 ~ 29884805 (+)
G1725309 NA non-coding downstream 254101 29886565 ~ 29886991 (+)
G1724262 LOC106609200 other upstream 372306 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 417952 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1288501 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1307618 28311018 ~ 28335924 (+)
G1722079 NA other upstream 2810300 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 257822 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 949538 30582002 ~ 30590636 (+)
G1726222 NA other downstream 972836 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 1249379 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1508133 31140597 ~ 31141090 (+)

Expression


Co-expression Network