Gene
RNA
| Item | Value |
|---|---|
| gene id | G1725187 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 29653740 ~ 29654008 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1976313 | True | 269 | lncRNA | 0.44 | 1 | 29653740 | 29654008 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942782 | NA | coding | upstream | 23730 | 29624282 ~ 29630010 (+) |
| LOC110501056 | LOC106576126 | coding | upstream | 401831 | 29247917 ~ 29251909 (+) |
| LOC110500200 | LOC106609198 | coding | upstream | 458944 | 29189035 ~ 29194796 (+) |
| LOC110500199 | LOC106609197 | coding | upstream | 469789 | 29173599 ~ 29183951 (+) |
| cog5 | LOC106609192 | coding | upstream | 485469 | 29080304 ~ 29168271 (+) |
| LOC110500208 | LOC106609208 | coding | downstream | 326876 | 29980884 ~ 29993056 (+) |
| LOC110500209 | LOC106609209 | coding | downstream | 339437 | 29993445 ~ 30002054 (+) |
| LOC110500210 | LOC106609211 | coding | downstream | 348396 | 30002404 ~ 30009586 (+) |
| cin | cin | coding | downstream | 419439 | 30073447 ~ 30075203 (+) |
| LOC110501059 | LOC106609213 | coding | downstream | 445362 | 30099370 ~ 30113179 (+) |
| G1725123 | NA | non-coding | upstream | 6959 | 29646553 ~ 29646781 (+) |
| G1725115 | NA | non-coding | upstream | 21276 | 29632235 ~ 29632464 (+) |
| G1725108 | NA | non-coding | upstream | 37024 | 29616516 ~ 29616716 (+) |
| G1725070 | NA | non-coding | upstream | 85884 | 29567646 ~ 29567856 (+) |
| G1724965 | NA | non-coding | upstream | 154841 | 29497818 ~ 29498899 (+) |
| G1725306 | NA | non-coding | downstream | 228515 | 29882523 ~ 29882927 (+) |
| G1725307 | NA | non-coding | downstream | 230491 | 29884499 ~ 29884805 (+) |
| G1725309 | NA | non-coding | downstream | 232557 | 29886565 ~ 29886991 (+) |
| G1725308 | NA | non-coding | downstream | 233131 | 29887139 ~ 29888030 (+) |
| G1725313 | LOC106609204 | non-coding | downstream | 238048 | 29892056 ~ 29892403 (+) |
| G1724262 | LOC106609200 | other | upstream | 393811 | 29256778 ~ 29259929 (+) |
| G1724234 | LOC106609199 | other | upstream | 439457 | 29209169 ~ 29214283 (+) |
| LOC110500183 | LOC106609180 | other | upstream | 1310006 | 28341423 ~ 28343734 (+) |
| LOC110501048 | LOC106609163 | other | upstream | 1329123 | 28311018 ~ 28335924 (+) |
| G1722079 | NA | other | upstream | 2831805 | 26821647 ~ 26821935 (+) |
| G1725312 | LOC106576088 | other | downstream | 236278 | 29890286 ~ 29891957 (+) |
| G1726209 | LOC106609221 | other | downstream | 927994 | 30582002 ~ 30590636 (+) |
| G1726222 | NA | other | downstream | 951292 | 30605300 ~ 30611361 (+) |
| LOC110500226 | LOC106576059 | other | downstream | 1227835 | 30881776 ~ 30889293 (+) |
| G1726863 | NA | other | downstream | 1486589 | 31140597 ~ 31141090 (+) |
