G1725309


Basic Information

Item Value
gene id G1725309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29886565 ~ 29886991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976439
gggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatctcaacattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccagctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976439 True 427 lncRNA 0.44 1 29886565 29886991

Neighbor

gene id symbol gene type direction distance location
LOC118942782 NA coding upstream 256555 29624282 ~ 29630010 (+)
LOC110501056 LOC106576126 coding upstream 634656 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 691769 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 702614 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 718294 29080304 ~ 29168271 (+)
LOC110500208 LOC106609208 coding downstream 93893 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 106454 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 115413 30002404 ~ 30009586 (+)
cin cin coding downstream 186456 30073447 ~ 30075203 (+)
LOC110501059 LOC106609213 coding downstream 212379 30099370 ~ 30113179 (+)
G1725307 NA non-coding upstream 1760 29884499 ~ 29884805 (+)
G1725306 NA non-coding upstream 3638 29882523 ~ 29882927 (+)
G1725187 NA non-coding upstream 232557 29653740 ~ 29654008 (+)
G1725123 NA non-coding upstream 239784 29646553 ~ 29646781 (+)
G1725115 NA non-coding upstream 254101 29632235 ~ 29632464 (+)
G1725308 NA non-coding downstream 148 29887139 ~ 29888030 (+)
G1725313 LOC106609204 non-coding downstream 5065 29892056 ~ 29892403 (+)
G1725314 NA non-coding downstream 7491 29894482 ~ 29894725 (+)
G1725315 NA non-coding downstream 8145 29895136 ~ 29895342 (+)
G1725316 NA non-coding downstream 8532 29895523 ~ 29895869 (+)
G1724262 LOC106609200 other upstream 626636 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 672282 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1542831 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1561948 28311018 ~ 28335924 (+)
G1722079 NA other upstream 3064630 26821647 ~ 26821935 (+)
G1725312 LOC106576088 other downstream 3295 29890286 ~ 29891957 (+)
G1726209 LOC106609221 other downstream 695011 30582002 ~ 30590636 (+)
G1726222 NA other downstream 718309 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 994852 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1253606 31140597 ~ 31141090 (+)

Expression


Co-expression Network