Gene
RNA
| Item | Value |
|---|---|
| gene id | G1725308 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 29887139 ~ 29888030 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1976438 | True | 745 | lncRNA | 0.49 | 2 | 29887139 | 29888030 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942782 | NA | coding | upstream | 257129 | 29624282 ~ 29630010 (+) |
| LOC110501056 | LOC106576126 | coding | upstream | 635230 | 29247917 ~ 29251909 (+) |
| LOC110500200 | LOC106609198 | coding | upstream | 692343 | 29189035 ~ 29194796 (+) |
| LOC110500199 | LOC106609197 | coding | upstream | 703188 | 29173599 ~ 29183951 (+) |
| cog5 | LOC106609192 | coding | upstream | 718868 | 29080304 ~ 29168271 (+) |
| LOC110500208 | LOC106609208 | coding | downstream | 92854 | 29980884 ~ 29993056 (+) |
| LOC110500209 | LOC106609209 | coding | downstream | 105415 | 29993445 ~ 30002054 (+) |
| LOC110500210 | LOC106609211 | coding | downstream | 114374 | 30002404 ~ 30009586 (+) |
| cin | cin | coding | downstream | 185417 | 30073447 ~ 30075203 (+) |
| LOC110501059 | LOC106609213 | coding | downstream | 211340 | 30099370 ~ 30113179 (+) |
| G1725309 | NA | non-coding | upstream | 148 | 29886565 ~ 29886991 (+) |
| G1725307 | NA | non-coding | upstream | 2334 | 29884499 ~ 29884805 (+) |
| G1725306 | NA | non-coding | upstream | 4212 | 29882523 ~ 29882927 (+) |
| G1725187 | NA | non-coding | upstream | 233131 | 29653740 ~ 29654008 (+) |
| G1725123 | NA | non-coding | upstream | 240358 | 29646553 ~ 29646781 (+) |
| G1725313 | LOC106609204 | non-coding | downstream | 4026 | 29892056 ~ 29892403 (+) |
| G1725314 | NA | non-coding | downstream | 6452 | 29894482 ~ 29894725 (+) |
| G1725315 | NA | non-coding | downstream | 7106 | 29895136 ~ 29895342 (+) |
| G1725316 | NA | non-coding | downstream | 7493 | 29895523 ~ 29895869 (+) |
| G1725318 | NA | non-coding | downstream | 9367 | 29897397 ~ 29897788 (+) |
| G1724262 | LOC106609200 | other | upstream | 627210 | 29256778 ~ 29259929 (+) |
| G1724234 | LOC106609199 | other | upstream | 672856 | 29209169 ~ 29214283 (+) |
| LOC110500183 | LOC106609180 | other | upstream | 1543405 | 28341423 ~ 28343734 (+) |
| LOC110501048 | LOC106609163 | other | upstream | 1562522 | 28311018 ~ 28335924 (+) |
| G1722079 | NA | other | upstream | 3065204 | 26821647 ~ 26821935 (+) |
| G1725312 | LOC106576088 | other | downstream | 2256 | 29890286 ~ 29891957 (+) |
| G1726209 | LOC106609221 | other | downstream | 693972 | 30582002 ~ 30590636 (+) |
| G1726222 | NA | other | downstream | 717270 | 30605300 ~ 30611361 (+) |
| LOC110500226 | LOC106576059 | other | downstream | 993813 | 30881776 ~ 30889293 (+) |
| G1726863 | NA | other | downstream | 1252567 | 31140597 ~ 31141090 (+) |
