G1725313 (LOC106609204)


Basic Information

Item Value
gene id G1725313
gene name LOC106609204
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29892056 ~ 29892403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976443
CCCCGCTCGTAGACCCCTCCTCCTCGGGCTGcgccacctcctctcctccctcctcctcctcctggtcactcctcctcctctcctccccctctcctgtctgtccatTCTCCGgcgtccctccctgctccccccagggctcagggctgtgtgtgtgggtcccTCCAGGGGTGTGTGGAGCCCGGGGGAAGTGGGCCAGCTCCTCCTCTGAGgacaggaactggaacacagcATTATTGGAGGTCTGGATTGGCTCCAGGCGCATCACGTAGTCCGGCCGGTCCTTCCTGGGGTAGATGGCCTCCAGGAAGTCCTTCATGGCCCCGCTCTGCTTGTCACCATCGCCCGCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976443 True 348 lncRNA 0.66 1 29892056 29892403

Neighbor

gene id symbol gene type direction distance location
LOC118942782 NA coding upstream 262046 29624282 ~ 29630010 (+)
LOC110501056 LOC106576126 coding upstream 640147 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 697260 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 708105 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 723785 29080304 ~ 29168271 (+)
LOC110500208 LOC106609208 coding downstream 88481 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 101042 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 110001 30002404 ~ 30009586 (+)
cin cin coding downstream 181044 30073447 ~ 30075203 (+)
LOC110501059 LOC106609213 coding downstream 206967 30099370 ~ 30113179 (+)
G1725308 NA non-coding upstream 4026 29887139 ~ 29888030 (+)
G1725309 NA non-coding upstream 5065 29886565 ~ 29886991 (+)
G1725307 NA non-coding upstream 7251 29884499 ~ 29884805 (+)
G1725306 NA non-coding upstream 9129 29882523 ~ 29882927 (+)
G1725187 NA non-coding upstream 238048 29653740 ~ 29654008 (+)
G1725314 NA non-coding downstream 2079 29894482 ~ 29894725 (+)
G1725315 NA non-coding downstream 2733 29895136 ~ 29895342 (+)
G1725316 NA non-coding downstream 3120 29895523 ~ 29895869 (+)
G1725318 NA non-coding downstream 4994 29897397 ~ 29897788 (+)
G1725320 NA non-coding downstream 10598 29903001 ~ 29903220 (+)
G1725312 LOC106576088 other upstream 99 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 632127 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 677773 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1548322 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1567439 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 689599 30582002 ~ 30590636 (+)
G1726222 NA other downstream 712897 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 989440 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1248194 31140597 ~ 31141090 (+)
G1727146 NA other downstream 1556993 31449396 ~ 31450117 (+)

Expression


Co-expression Network