G1725315


Basic Information

Item Value
gene id G1725315
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29895136 ~ 29895342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976445
ctaatatactgtgctgtactatacGGTACTgaactctattgtactgtactatactctactgtactgaagtttactgtactctactgtgttgtactttgatgtccaaacttgtgaaagaTAGAGATGTCTATTGTTTCATATTTGGTCCGGTCCAACCTAATTTGATCTTGTTTGGGGCGGAGCTCATTAAAATAATTTGTtgtttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976445 True 207 lncRNA 0.35 1 29895136 29895342

Neighbor

gene id symbol gene type direction distance location
LOC118942782 NA coding upstream 265126 29624282 ~ 29630010 (+)
LOC110501056 LOC106576126 coding upstream 643227 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 700340 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 711185 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 726865 29080304 ~ 29168271 (+)
LOC110500208 LOC106609208 coding downstream 85542 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 98103 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 107062 30002404 ~ 30009586 (+)
cin cin coding downstream 178105 30073447 ~ 30075203 (+)
LOC110501059 LOC106609213 coding downstream 204028 30099370 ~ 30113179 (+)
G1725314 NA non-coding upstream 411 29894482 ~ 29894725 (+)
G1725313 LOC106609204 non-coding upstream 2733 29892056 ~ 29892403 (+)
G1725308 NA non-coding upstream 7106 29887139 ~ 29888030 (+)
G1725309 NA non-coding upstream 8145 29886565 ~ 29886991 (+)
G1725307 NA non-coding upstream 10331 29884499 ~ 29884805 (+)
G1725316 NA non-coding downstream 181 29895523 ~ 29895869 (+)
G1725318 NA non-coding downstream 2055 29897397 ~ 29897788 (+)
G1725320 NA non-coding downstream 7659 29903001 ~ 29903220 (+)
G1725322 NA non-coding downstream 12973 29908315 ~ 29908549 (+)
G1725325 NA non-coding downstream 18693 29914035 ~ 29916320 (+)
G1725312 LOC106576088 other upstream 3179 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 635207 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 680853 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1551402 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1570519 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 686660 30582002 ~ 30590636 (+)
G1726222 NA other downstream 709958 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 986501 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1245255 31140597 ~ 31141090 (+)
G1727146 NA other downstream 1554054 31449396 ~ 31450117 (+)

Expression


Co-expression Network