Gene
RNA
| Item | Value |
|---|---|
| gene id | G1725327 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 29923565 ~ 29923867 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ataxin-7-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1976460 | True | 273 | lncRNA | 0.59 | 2 | 29923565 | 29923867 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942782 | NA | coding | upstream | 293555 | 29624282 ~ 29630010 (+) |
| LOC110501056 | LOC106576126 | coding | upstream | 671656 | 29247917 ~ 29251909 (+) |
| LOC110500200 | LOC106609198 | coding | upstream | 728769 | 29189035 ~ 29194796 (+) |
| LOC110500199 | LOC106609197 | coding | upstream | 739614 | 29173599 ~ 29183951 (+) |
| cog5 | LOC106609192 | coding | upstream | 755294 | 29080304 ~ 29168271 (+) |
| LOC110500208 | LOC106609208 | coding | downstream | 57017 | 29980884 ~ 29993056 (+) |
| LOC110500209 | LOC106609209 | coding | downstream | 69578 | 29993445 ~ 30002054 (+) |
| LOC110500210 | LOC106609211 | coding | downstream | 78537 | 30002404 ~ 30009586 (+) |
| cin | cin | coding | downstream | 149580 | 30073447 ~ 30075203 (+) |
| LOC110501059 | LOC106609213 | coding | downstream | 175503 | 30099370 ~ 30113179 (+) |
| G1725325 | NA | non-coding | upstream | 7245 | 29914035 ~ 29916320 (+) |
| G1725322 | NA | non-coding | upstream | 15016 | 29908315 ~ 29908549 (+) |
| G1725320 | NA | non-coding | upstream | 20345 | 29903001 ~ 29903220 (+) |
| G1725318 | NA | non-coding | upstream | 25777 | 29897397 ~ 29897788 (+) |
| G1725316 | NA | non-coding | upstream | 27696 | 29895523 ~ 29895869 (+) |
| G1725338 | NA | non-coding | downstream | 8961 | 29932828 ~ 29933028 (+) |
| G1725339 | NA | non-coding | downstream | 9672 | 29933539 ~ 29933773 (+) |
| G1725340 | NA | non-coding | downstream | 10064 | 29933931 ~ 29934362 (+) |
| G1725341 | NA | non-coding | downstream | 10762 | 29934629 ~ 29934853 (+) |
| G1725345 | NA | non-coding | downstream | 25695 | 29949562 ~ 29952559 (+) |
| G1725312 | LOC106576088 | other | upstream | 31608 | 29890286 ~ 29891957 (+) |
| G1724262 | LOC106609200 | other | upstream | 663636 | 29256778 ~ 29259929 (+) |
| G1724234 | LOC106609199 | other | upstream | 709282 | 29209169 ~ 29214283 (+) |
| LOC110500183 | LOC106609180 | other | upstream | 1579831 | 28341423 ~ 28343734 (+) |
| LOC110501048 | LOC106609163 | other | upstream | 1598948 | 28311018 ~ 28335924 (+) |
| G1726209 | LOC106609221 | other | downstream | 658135 | 30582002 ~ 30590636 (+) |
| G1726222 | NA | other | downstream | 681433 | 30605300 ~ 30611361 (+) |
| LOC110500226 | LOC106576059 | other | downstream | 957976 | 30881776 ~ 30889293 (+) |
| G1726863 | NA | other | downstream | 1216730 | 31140597 ~ 31141090 (+) |
| G1727146 | NA | other | downstream | 1525529 | 31449396 ~ 31450117 (+) |
