G1725356


Basic Information

Item Value
gene id G1725356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 29955519 ~ 29955882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976494
ccagggtgtggcatgggtttttgtatgtggtgtgtatgtatggggattgtagctagtggggtgttctagctaagtctatggctgtctgaagtggttctcaatcagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatattctttgagtttgtcgtgggtgattgtccttagtgtcctgatgtcattgttctgtgttaggttacacaagtataggctgtttcggttttcgttaagtttattgttttggtagtgtttgtgtttagtgtgtttcttcattaaacatggattgcaatagacacgccgcattttggtccgactctccttctcaccaagaaaaccgttaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976494 True 364 lncRNA 0.43 1 29955519 29955882

Neighbor

gene id symbol gene type direction distance location
LOC118942782 NA coding upstream 325509 29624282 ~ 29630010 (+)
LOC110501056 LOC106576126 coding upstream 703610 29247917 ~ 29251909 (+)
LOC110500200 LOC106609198 coding upstream 760723 29189035 ~ 29194796 (+)
LOC110500199 LOC106609197 coding upstream 771568 29173599 ~ 29183951 (+)
cog5 LOC106609192 coding upstream 787248 29080304 ~ 29168271 (+)
LOC110500208 LOC106609208 coding downstream 25002 29980884 ~ 29993056 (+)
LOC110500209 LOC106609209 coding downstream 37563 29993445 ~ 30002054 (+)
LOC110500210 LOC106609211 coding downstream 46522 30002404 ~ 30009586 (+)
cin cin coding downstream 117565 30073447 ~ 30075203 (+)
LOC110501059 LOC106609213 coding downstream 143488 30099370 ~ 30113179 (+)
G1725345 NA non-coding upstream 2960 29949562 ~ 29952559 (+)
G1725341 NA non-coding upstream 20666 29934629 ~ 29934853 (+)
G1725340 NA non-coding upstream 21157 29933931 ~ 29934362 (+)
G1725339 NA non-coding upstream 21746 29933539 ~ 29933773 (+)
G1725338 NA non-coding upstream 22491 29932828 ~ 29933028 (+)
G1725360 NA non-coding downstream 3201 29959083 ~ 29959291 (+)
G1725432 NA non-coding downstream 168791 30124673 ~ 30124884 (+)
G1725436 NA non-coding downstream 172982 30128864 ~ 30129130 (+)
G1725438 NA non-coding downstream 174871 30130753 ~ 30131062 (+)
G1725312 LOC106576088 other upstream 63562 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 695590 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 741236 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1611785 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1630902 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 626120 30582002 ~ 30590636 (+)
G1726222 NA other downstream 649418 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 925961 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1184715 31140597 ~ 31141090 (+)
G1727146 NA other downstream 1493514 31449396 ~ 31450117 (+)

Expression


Co-expression Network