G1725436


Basic Information

Item Value
gene id G1725436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30128864 ~ 30129130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976588
ggttcaaattgatgggaagatggagccaaatacaggaccattctggaaaaaaacctgatggagtctgcaaaagacctgagactgggacggagatgtgtattccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgggaatctgtggaaagaactgaaaactgctgtttacaaatgctgtccatccaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976588 True 267 lncRNA 0.41 1 30128864 30129130

Neighbor

gene id symbol gene type direction distance location
LOC110501059 LOC106609213 coding upstream 15685 30099370 ~ 30113179 (+)
cin cin coding upstream 53684 30073447 ~ 30075203 (+)
LOC110500210 LOC106609211 coding upstream 119278 30002404 ~ 30009586 (+)
LOC110500209 LOC106609209 coding upstream 126810 29993445 ~ 30002054 (+)
LOC110500208 LOC106609208 coding upstream 135808 29980884 ~ 29993056 (+)
LOC110500214 cssa17h12orf56 coding downstream 1943 30131073 ~ 30135545 (+)
LOC110500213 LOC106609216 coding downstream 6496 30135626 ~ 30138363 (+)
LOC110500212 cr3l2 coding downstream 9943 30139073 ~ 30166652 (+)
LOC110501060 LOC106576074 coding downstream 40349 30169479 ~ 30218776 (+)
LOC110500216 LOC106609220 coding downstream 134969 30264099 ~ 30410281 (+)
G1725432 NA non-coding upstream 3980 30124673 ~ 30124884 (+)
G1725360 NA non-coding upstream 169573 29959083 ~ 29959291 (+)
G1725356 NA non-coding upstream 172982 29955519 ~ 29955882 (+)
G1725345 NA non-coding upstream 176305 29949562 ~ 29952559 (+)
G1725438 NA non-coding downstream 1623 30130753 ~ 30131062 (+)
G1725440 NA non-coding downstream 14656 30143786 ~ 30181651 (+)
G1725464 NA non-coding downstream 72468 30201598 ~ 30203607 (+)
G1725474 NA non-coding downstream 96840 30225970 ~ 30226172 (+)
G1725312 LOC106576088 other upstream 236907 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 868935 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 914581 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1785130 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1804247 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 452872 30582002 ~ 30590636 (+)
G1726222 NA other downstream 476170 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 752713 30881776 ~ 30889293 (+)
G1726863 NA other downstream 1011467 31140597 ~ 31141090 (+)
G1727146 NA other downstream 1320266 31449396 ~ 31450117 (+)

Expression


Co-expression Network