G1725796


Basic Information

Item Value
gene id G1725796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30215519 ~ 30218755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976984
CTTCTTCTAAAATTATACGATTATTCAGATGTTACAATTGTACACCCCGGCATGCTTTATTTGCCTCTCAAACATCATTTTATTTCCCCAAATAACTTGCAGAACATTTAACAGTTGAACAACAGTGATTTTGGGTGAAAACCTTTTAAGTCCCCGTTGGAAGATATCTGTGGGAGAAGAGTGTTTTTGGTTTGAGGTCCGATTATTTCAGAAAGTTCTTGTAACATCTGCAACATCTTTGTTACTGTAACATCGAAAGACTCAATATGGCACTAACCAATCCCTGTGGGGGGAAAATGGGGATTGAGGGAAATCAGTGTAAACTCAAAAGAAGCTAAAGAAATCTAGAAGTAGTAGTACCCAGTATGACCAGCAGCTATTGTTCTCCATGTCTGTACCGGCCTTATCAACGCCCTGTAGTACTGGGTATTACTGGGTTATAGGAGGGTAAAGGTCAGACCTAGGTCCGATTCGTTAAATACTTGAGGTGCACTTCATTTGGCTTGACTAGCATGCAGGTTGGGTGGAGTTTGCACTTTTGctactattctattggttccattgtaccAGACAAGCAAAGCACACCTCGAGTATTTGACACAGACACCGGTCTGAATCATTATAATTACAGGTTATCTAACAGGCACACTGCGGAGACTAACTGACTACTGATAAGGTCTCTCAGTAGACTGAATATACAGCATTCCCACTAGGTTCTCTTATTATGTTCTCTAAGGTTATTTCCTAGGGTTAGGGGCAGGCTGCCTTGATATTCAACCACACTAGTGTTCAAATTCATCTTCACAGACACTAAGAACGTTGGGAGACTTCAAGAGACTCTCCTCACAGGCCCTCATTACTGTGACCTCACTGTGACATCACGTCAATGACCAATCAAAACACAGGAAACGTTGTGAGAGGCAGCACTATACGACTTTTAGAGAAtacaaaataaacaacaacatTCAAGTAATCCCATGGTCTGAAAAATACAAAAGCAAAAGTAGAACCATTAAACACTTCAAACCTTACCCATATATACTTAGGTATAAAACTATTCAAATCTTAACAAtgataataacataataataataatgccagTTTGTGATGCCATTATTATGTGGTAGCAACTTCTAAGGAGGGAAGGAAAATGGCATGCACAACAATGTTGAATAATAAAGAacacaaaataatacaaaatcaTATCCAATTTATTCACAATAATCATAAATAATGGATGTTTGtctcatagagatagatagaggactcatctttgtatctgtgccaaaATGGCATATGTGACTGCATGGGCATCTCCATTTTAgagtagtcaattttcttctcAATTTGTATTTGAAAAAAAAGTGAAAAGCTAGTATTGGCAATTTACCACCACCTGCAGTTCTAGAATCCTGAACAAAATCTTGTGTGTCGTTTATTTAtcgtggccactagatggcagtaataTATCTTAAAGCCATTTGCAAACCATAGGCAACCCGATTTGAAGAAGTGGAAGACAATGCTCGGATCATTGGCTGAAAGTCCCaaccataggaatccccacccagttgactaaaAGAAAATGGTTGAAAACTTAATGGAAATGCCCATGCTAAAACGGGTTATATTCATTTAGATTCCTCAATCTATCTCTATGGTTTGTGGCGCTAAGCACGTCCAGGCAGGGtagtgggggatggagggaggcagaaCAACATAAAAACATTAACATTTCCCAGGTCATATTCGACCACTGGTAGACGCTGAATAAATAAAACAAGGTCAAGTACTAAAGTACATCTGTCTTGGTTTTCAGAACAGTCATCTTAACACATTACAGCTGTTTTTACAATACCTAACAGTAGTTTTAGTGTTTAAATCATATAAAGTCAACCAAACTAAACCCACCCCTTTGAGGTGTCCACAACAACAgaaacacagccacacacacaccacacacacacaccagcacggTAAGAAATTGCACATTCAACACTCCTTGGTGCCATAAAGCACTGTTAAAACATTAATGTAATGTAAACATGAATAGGGAAATGCACAAAAATCATTCATTCATATTGCATTGAATATGGCTCAGAATCTTTTTTTTTACTATTCTCTCTCAAgcagccccccaccccccccccacccccacacacacacacacactccccctctgtctctgcatCACACAAACACGCATATGCACGCACACGCAAGTCTAAAAGaactgaacacacaaacacacattctgtAGGTATGTACATGCTGCTCGGGTAGAGCTCTAGGTTGGGTGTGTAATGGGTCCCCGGGGCTGCATGAAGAATCAGTCCGTCTCTCTTTTCTTTGTCTGCCCAGCTGTCTGTCCACTCATCTCAGTCCCATACTGGCCTCCAGGGGGGGGGTTATGGAGGCTTAGAATTGGTTGTCTACAAGCCTAGCAGTGTTGTTGGGATAGCAGTAGTGGTATCCTAatgtagcagtggtagtagtatggAGGGTGCTGGGTGCTGTCCCTGCCTCACAGTGCTGCGTGTCGTTGGCACACGTCTGAATGATTCACAAAGGCCTTCTGGGAAATACATACATTGAAACTATGTATGTTTAACCGTGGTTGAACCGCGTTGGTACAGTATGTAAGGCTGCAGGGCCACACTGAGAGAGGGTCTGTGTGTCTGCGAACCCTCACCTCTgatccctgacccctaaccccctgAACCCTAACCTAGCCCAGACCGTGGTATTCAGTGAACAACAGGCAACTCCATACCCCAACACTCCCATACGTttacaatcaatcaataaataaataaaagcaataATAAACAATATTAATTTTGATGAAACATTTTCCTGtgcaggatagaacagagtcTAAAGCACGTCAGGCTGCTCCTGTCTGTCCATCCGCCTGTCCATCCCTCAGTCAATCTATGGAGGTGAAGGGGGCttacctctctcctccatctctcatcctcttctctctgtcctcccctctctccatgtgaagtcctctctctctctctctctctctctctctcttctcttctcttctcttctcttctcttctcttctcttctctctctcatacagCAGTCTCTAGATCTTCGTGGGAGACAGTGGTAGGGAGCTGTTTGCTGGTCAGGTAGGAGGCCAGCTCTTGGTCCCCCGCATCACGAGCTTGCTCTACTGGGGTCTTAC
>TU1976985
CTTCTTCTAAAATTATACGATTATTCAGATGTTACAATTGTACACCCCGGCATGCTTTATTTGCCTCTCAAACATCATTTTATTTCCCCAAATAACTTGCAGAACATTTAACAGTTGAACAACAGTGATTTTGGGTGAAAACCTTTTAAGTCCCCGTTGGAAGATATCTGTGGGAGAAGAGTGTTTTTGGTTTGAGGTCCGATTATTTCAGAAAGTTCTTGTAACATCTGCAACATCTTTGTTACTGTAACATCGAAAGACTCAATATGGCACTAACCAATCCCTGTGGGGGGAAAATGGGGATTGAGGGAAATCAGTGTAAACTCAAAAGAAGCTAAAGAAATCTAGAAGTAGTAGTACCCAGTATGACCAGCAGCTATTGTTCTCCATGTCTGTACCGGCCTTATCAACGCCCTGTAGTACTGGGTATTACTGGGTTATAGGAGGGTAAAGGTCAGACCTAGGTCCGATTCGTTAAATACTTGAGGTGCACTTCATTTGGCTTGACTAGCATGCAGGTTGGGTGGAGTTTGCACTTTTGctactattctattggttccattgtaccAGACAAGCAAAGCACACCTCGAGTATTTGACACAGACACCGGTCTGAATCATTATAATTACAGGTTATCTAACAGGCACACTGCGGAGACTAACTGACTACTGATAAGGTCTCTCAGTAGACTGAATATACAGCATTCCCACTAGGTTCTCTTATTATGTTCTCTAAGGTTATTTCCTAGGGTTAGGGGCAGGCTGCCTTGATATTCAACCACACTAGTGTTCAAATTCATCTTCACAGACACTAAGAACGTTGGGAGACTTCAAGAGACTCTCCTCACAGGCCCTCATTACTGTGACCTCACTGTGACATCACGTCAATGACCAATCAAAACACAGGAAACGTTGTGAGAGGCAGCACTATACGACTTTTAGAGAAtacaaaataaacaacaacatTCAAGTAATCCCATGGTCTGAAAAATACAAAAGCAAAAGTAGAACCATTAAACACTTCAAACCTTACCCATATATACTTAGGTATAAAACTATTCAAATCTTAACAAtgataataacataataataataatgccagTTTGTGATGCCATTATTATGTGGTAGCAACTTCTAAGGAGGGAAGGAAAATGGCATGCACAACAATGTTGAATAATAAAGAacacaaaataatacaaaatcaTATCCAATTTATTCACAATAATCATAAATAATGGATGTTTGtctcatagagatagatagaggactcatctttgtatctgtgccaaaATGGCATATGTGACTGCATGGGCATCTCCATTTTAgagtagtcaattttcttctcAATTTGTATTTGAAAAAAAAGTGAAAAGCTAGTATTGGCAATTTACCACCACCTGCAGTTCTAGAATCCTGAACAAAATCTTGTGTGTCGTTTATTTAtcgtggccactagatggcagtaataTATCTTAAAGCCATTTGCAAACCATAGGCAACCCGATTTGAAGAAGTGGAAGACAATGCTCGGATCATTGGCTGAAAGTCCCaaccataggaatccccacccagttgactaaaAGAAAATGGTTGAAAACTTAATGGAAATGCCCATGCTAAAACGGGTTATATTCATTTAGATTCCTCAATCTATCTCTATGGTTTGTGGCGCTAAGCACGTCCAGGCAGGGtagtgggggatggagggaggcagaaCAACATAAAAACATTAACATTTCCCAGGTCATATTCGACCACTGGTAGACGCTGAATAAATAAAACAAGGTCAAGTACTAAAGTACATCTGTCTTGGTTTTCAGAACAGTCATCTTAACACATTACAGCTGTTTTTACAATACCTAACAGTAGTTTTAGTGTTTAAATCATATAAAGTCAACCAAACTAAACCCACCCCTTTGAGGTGTCCACAACAACAgaaacacagccacacacacaccacacacacacaccagcacggTAAGAAATTGCACATTCAACACTCCTTGGTGCCATAAAGCACTGTTAAAACATTAATGTAATGTAAACATGAATAGGGAAATGCACAAAAATCATTCATTCATATTGCATTGAATATGGCTCAGAATCTTTTTTTTTACTATTCTCTCTCAAgcagccccccaccccccccccacccccacacacacacacacactccccctctgtctctgcatCACACAAACACGCATATGCACGCACACGCAAGTCTAAAAGaactgaacacacaaacacacattctgtAGGTATGTACATGCTGCTCGGGTAGAGCTCTAGGTTGGGTGTGTAATGGGTCCCCGGGGCTGCATGAAGAATCAGTCCGTCTCTCTTTTCTTTGTCTGCCCAGCTGTCTGTCCACTCATCTCAGTCCCATACTGGCCTCCAGGGGGGGGGTTATGGAGGCTTAGAATTGGTTGTCTACAAGCCTAGCAGTGTTGTTGGGATAGCAGTAGTGGTATCCTAatgtagcagtggtagtagtatggAGGGTGCTGGGTGCTGTCCCTGCCTCACAGTGCTGCGTGTCGTTGGCACACGTCTGAATGATTCACAAAGGCCTTCTGGGAAATACATACATTGAAACTATGTATGTTTAACCGTGGTTGAACCGCGTTGGTACAGTATGTAAGGCTGCAGGGCCACACTGAGAGAGGGTCTGTGTGTCTGCGAACCCTCACCTCTgatccctgacccctaaccccctgAACCCTAACCTAGCCCAGACCGTGGTATTCAGTGAACAACAGGCAACTCCATACCCCAACACTCCCATACGTttacaatcaatcaataaataaataaaagcaataATAAACAATATTAATTTTGATGAAACATTTTCCTGtgcaggatagaacagagtcTAAAGCACGTCAGGCTGCTCCTGTCTGTCCATCCGCCTGTCCATCCCTCAGTCAATCTATGGAGGTGAAGGGGGCttacctctctcctccatctctcatcctcttctctctgtcctcccctctctccatgtgaagtcctctctctctctctctctctctctctcctcttctcttctcttctcttctcttctcttctctctctcatacagCAGTCTCTAGATCTTCGTGGGAGACAGTGGTAGGGAGCTGTTTGCTGGTCAGGTAGGAGGCCAGCTCTTGGTCCCCCGCATCACGAGCTTGCTCTACTGGGGTCTTAC

Function

NR:

description
diacylglycerol kinase iota-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976984 False 3204 lncRNA 0.42 2 30215519 30218755
TU1976985 True 3195 lncRNA 0.42 2 30215519 30218755

Neighbor

gene id symbol gene type direction distance location
LOC110501058 LOC106609212 coding downstream 122151 30075220 ~ 30093368 (-)
LOC110500211 LOC106609210 coding downstream 151474 30010193 ~ 30064045 (-)
LOC110500207 LOC106609207 coding downstream 236704 29961116 ~ 29978815 (-)
LOC110500206 LOC106609206 coding downstream 262751 29937860 ~ 29952768 (-)
LOC110501057 LOC106609205 coding downstream 278973 29913977 ~ 29936546 (-)
LOC110500217 LOC106609221 coding upstream 367871 30586626 ~ 30603677 (-)
LOC118942798 LOC106534401 coding upstream 421009 30639764 ~ 30641616 (-)
LOC110500222 LOC106609227 coding upstream 607181 30825936 ~ 30837886 (-)
LOC110500224 LOC106609232 coding upstream 619738 30838493 ~ 30841464 (-)
LOC110500225 LOC106576064 coding upstream 633075 30851830 ~ 30861709 (-)
G1725791 LOC106609217 non-coding downstream 8462 30206279 ~ 30207057 (-)
G1725739 NA non-coding downstream 77165 30137273 ~ 30138354 (-)
G1725715 NA non-coding downstream 130605 30084272 ~ 30084914 (-)
G1725636 LOC106573797 non-coding downstream 307885 29907257 ~ 29907634 (-)
G1725809 NA non-coding upstream 19645 30238400 ~ 30238625 (-)
G1725923 NA non-coding upstream 43655 30262410 ~ 30262634 (-)
G1726004 LOC106609220 non-coding upstream 152686 30371441 ~ 30374404 (-)
G1726019 LOC106609220 non-coding upstream 173603 30392358 ~ 30399215 (-)
G1726036 NA non-coding upstream 197340 30416095 ~ 30416311 (-)
G1725623 NA other downstream 329082 29885811 ~ 29886437 (-)
G1725622 NA other downstream 330338 29883151 ~ 29885578 (-)
G1724631 NA other downstream 1031571 29180457 ~ 29183948 (-)
G1724553 dus4l other downstream 1135165 29078098 ~ 29080354 (-)
LOC110500228 LOC106609233 other upstream 661866 30879517 ~ 30881416 (-)
G1726665 LOC103371314 other upstream 710595 30929350 ~ 30932816 (-)
G1727354 NA other upstream 1272765 31491520 ~ 31492302 (-)
G1727426 LOC107662719 other upstream 1380391 31599146 ~ 31599489 (-)
G1728665 NA other upstream 1948914 32167669 ~ 32168934 (-)

Expression


Co-expression Network