G1725481


Basic Information

Item Value
gene id G1725481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30246541 ~ 30246855 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1976644
gtggtatgcATGTTGTGTTagtcaaatgatacaacccccccaaaaatccattttaattccagtatgtatggcaacaaaatatgaaaaataccaagggggtggtgaatactttctgaaaccactgtattttgggagtttctcccatttatctctgcagatcctctcaagctgtcaggttggatggggagcgttgctgcacagctattttcaggcctctccagagatgtttgatcaggttcaagtccgggctctggctgggccactcaaggacattcagggactagtcccgaagcccctcctgcattgtcttgcctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1976644 True 315 lncRNA 0.47 1 30246541 30246855

Neighbor

gene id symbol gene type direction distance location
LOC110501060 LOC106576074 coding upstream 27765 30169479 ~ 30218776 (+)
LOC110500212 cr3l2 coding upstream 79889 30139073 ~ 30166652 (+)
LOC110500213 LOC106609216 coding upstream 108178 30135626 ~ 30138363 (+)
LOC110500214 cssa17h12orf56 coding upstream 110996 30131073 ~ 30135545 (+)
LOC110501059 LOC106609213 coding upstream 133362 30099370 ~ 30113179 (+)
LOC110500216 LOC106609220 coding downstream 17244 30264099 ~ 30410281 (+)
LOC110500929 rs3a coding downstream 297535 30544390 ~ 30545166 (+)
LOC110500218 tnni1 coding downstream 471725 30718580 ~ 30725274 (+)
LOC110500219 LOC105029072 coding downstream 503155 30750010 ~ 30807982 (+)
LOC110500220 tnnt2 coding downstream 561306 30808161 ~ 30821295 (+)
G1725475 NA non-coding upstream 19666 30226671 ~ 30226875 (+)
G1725474 NA non-coding upstream 20369 30225970 ~ 30226172 (+)
G1725464 NA non-coding upstream 42934 30201598 ~ 30203607 (+)
G1725440 NA non-coding upstream 64890 30143786 ~ 30181651 (+)
G1725840 NA non-coding downstream 49958 30296813 ~ 30297582 (+)
G1725817 LOC107575789 non-coding downstream 164414 30411269 ~ 30411616 (+)
G1726139 NA non-coding downstream 248270 30495125 ~ 30495592 (+)
G1726141 NA non-coding downstream 250222 30497077 ~ 30497309 (+)
G1726221 NA non-coding downstream 357851 30604706 ~ 30604907 (+)
G1725312 LOC106576088 other upstream 354584 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 986612 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 1032258 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1902807 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1921924 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 335147 30582002 ~ 30590636 (+)
G1726222 NA other downstream 358445 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 634988 30881776 ~ 30889293 (+)
G1726863 NA other downstream 893742 31140597 ~ 31141090 (+)
G1727146 NA other downstream 1202541 31449396 ~ 31450117 (+)

Expression


Co-expression Network