G1725840


Basic Information

Item Value
gene id G1725840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30296813 ~ 30297582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1977033
CCCAGATGGAAGGATGTAGGGATGTGGTGAACAAAGATACTCCGATGCAGCACGCTTCATAtaacctctaccctccctcccacaGAAAGACACTACGATGGGGCACGCTTCATATAACCTCTACCCTACCTCCCACAGAAAGACACTACGATGGGGCACGCTTCATAtaacctctaccctccctcccacaGAAAGACACTACGATGGGGCACGCTTCATAtaacctctaccctccctcccacaGAAAGACACTACGATGGGGCACGCTTCATAtaacctctaccctccctcccacaGAAAGACACTACGATGGGGCACGCTTCATAtaacctctaccctccctcccacaGAAAGACACTACGATGGGGCACGCTTCATAtaacctctaccctccctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1977033 True 399 lncRNA 0.52 2 30296813 30297582

Neighbor

gene id symbol gene type direction distance location
LOC110501060 LOC106576074 coding upstream 78037 30169479 ~ 30218776 (+)
LOC110500212 cr3l2 coding upstream 130161 30139073 ~ 30166652 (+)
LOC110500213 LOC106609216 coding upstream 158450 30135626 ~ 30138363 (+)
LOC110500214 cssa17h12orf56 coding upstream 161268 30131073 ~ 30135545 (+)
LOC110501059 LOC106609213 coding upstream 183634 30099370 ~ 30113179 (+)
LOC110500929 rs3a coding downstream 246808 30544390 ~ 30545166 (+)
LOC110500218 tnni1 coding downstream 420998 30718580 ~ 30725274 (+)
LOC110500219 LOC105029072 coding downstream 452428 30750010 ~ 30807982 (+)
LOC110500220 tnnt2 coding downstream 510579 30808161 ~ 30821295 (+)
LOC110500223 LOC106609230 coding downstream 543943 30841525 ~ 30851119 (+)
G1725481 NA non-coding upstream 49958 30246541 ~ 30246855 (+)
G1725475 NA non-coding upstream 69938 30226671 ~ 30226875 (+)
G1725474 NA non-coding upstream 70641 30225970 ~ 30226172 (+)
G1725464 NA non-coding upstream 93206 30201598 ~ 30203607 (+)
G1725440 NA non-coding upstream 115162 30143786 ~ 30181651 (+)
G1725817 LOC107575789 non-coding downstream 113687 30411269 ~ 30411616 (+)
G1726139 NA non-coding downstream 197543 30495125 ~ 30495592 (+)
G1726141 NA non-coding downstream 199495 30497077 ~ 30497309 (+)
G1726221 NA non-coding downstream 307124 30604706 ~ 30604907 (+)
G1726232 NA non-coding downstream 327198 30624780 ~ 30624980 (+)
G1725312 LOC106576088 other upstream 404856 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 1036884 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 1082530 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 1953079 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 1972196 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 284420 30582002 ~ 30590636 (+)
G1726222 NA other downstream 307718 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 584261 30881776 ~ 30889293 (+)
G1726863 NA other downstream 843015 31140597 ~ 31141090 (+)
G1727146 NA other downstream 1151814 31449396 ~ 31450117 (+)

Expression


Co-expression Network