G1726141


Basic Information

Item Value
gene id G1726141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30497077 ~ 30497309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1977346
atcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattatacgCTCAGTGGCTGTAGAGGCATGTCAGTCACCACCGCGTCTGCGTGTGGCAACCTCTTCAGTACCTGCGAACTGAGACAAGGATATCGGTCTGTGATATCGAAAAGTGTTTCACCAGTGGGAGTCATCGGGTCAGTTGCTGGACTGACG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1977346 True 233 lncRNA 0.45 1 30497077 30497309

Neighbor

gene id symbol gene type direction distance location
LOC110500216 LOC106609220 coding upstream 86796 30264099 ~ 30410281 (+)
LOC110501060 LOC106576074 coding upstream 278301 30169479 ~ 30218776 (+)
LOC110500212 cr3l2 coding upstream 330425 30139073 ~ 30166652 (+)
LOC110500213 LOC106609216 coding upstream 358714 30135626 ~ 30138363 (+)
LOC110500214 cssa17h12orf56 coding upstream 361532 30131073 ~ 30135545 (+)
LOC110500929 rs3a coding downstream 47081 30544390 ~ 30545166 (+)
LOC110500218 tnni1 coding downstream 221271 30718580 ~ 30725274 (+)
LOC110500219 LOC105029072 coding downstream 252701 30750010 ~ 30807982 (+)
LOC110500220 tnnt2 coding downstream 310852 30808161 ~ 30821295 (+)
LOC110500223 LOC106609230 coding downstream 344216 30841525 ~ 30851119 (+)
G1726139 NA non-coding upstream 1485 30495125 ~ 30495592 (+)
G1725817 LOC107575789 non-coding upstream 85461 30411269 ~ 30411616 (+)
G1725840 NA non-coding upstream 199495 30296813 ~ 30297582 (+)
G1725481 NA non-coding upstream 250222 30246541 ~ 30246855 (+)
G1725475 NA non-coding upstream 270202 30226671 ~ 30226875 (+)
G1726221 NA non-coding downstream 107397 30604706 ~ 30604907 (+)
G1726232 NA non-coding downstream 127471 30624780 ~ 30624980 (+)
G1726310 NA non-coding downstream 137905 30635214 ~ 30635420 (+)
G1726311 NA non-coding downstream 139057 30636366 ~ 30636579 (+)
G1726330 NA non-coding downstream 155141 30652450 ~ 30652811 (+)
G1725312 LOC106576088 other upstream 605120 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 1237148 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 1282794 29209169 ~ 29214283 (+)
LOC110500183 LOC106609180 other upstream 2153343 28341423 ~ 28343734 (+)
LOC110501048 LOC106609163 other upstream 2172460 28311018 ~ 28335924 (+)
G1726209 LOC106609221 other downstream 84693 30582002 ~ 30590636 (+)
G1726222 NA other downstream 107991 30605300 ~ 30611361 (+)
LOC110500226 LOC106576059 other downstream 384534 30881776 ~ 30889293 (+)
G1726863 NA other downstream 643288 31140597 ~ 31141090 (+)
G1727146 NA other downstream 952087 31449396 ~ 31450117 (+)

Expression


Co-expression Network