G1726232


Basic Information

Item Value
gene id G1726232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30624780 ~ 30624980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1977441
tacatgtatcactagccactttaactatgccactttgtttacataccctacattactcatctcatatgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcatctcatatgtatatactgtactcgataccatctactgcatctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1977441 True 201 lncRNA 0.33 1 30624780 30624980

Neighbor

gene id symbol gene type direction distance location
LOC110500929 rs3a coding upstream 79614 30544390 ~ 30545166 (+)
LOC110500216 LOC106609220 coding upstream 214499 30264099 ~ 30410281 (+)
LOC110501060 LOC106576074 coding upstream 406004 30169479 ~ 30218776 (+)
LOC110500212 cr3l2 coding upstream 458128 30139073 ~ 30166652 (+)
LOC110500213 LOC106609216 coding upstream 486417 30135626 ~ 30138363 (+)
LOC110500218 tnni1 coding downstream 93600 30718580 ~ 30725274 (+)
LOC110500219 LOC105029072 coding downstream 125030 30750010 ~ 30807982 (+)
LOC110500220 tnnt2 coding downstream 183181 30808161 ~ 30821295 (+)
LOC110500223 LOC106609230 coding downstream 216545 30841525 ~ 30851119 (+)
LOC110500930 LOC106609235 coding downstream 246293 30871273 ~ 30877399 (+)
G1726221 NA non-coding upstream 19873 30604706 ~ 30604907 (+)
G1726141 NA non-coding upstream 127471 30497077 ~ 30497309 (+)
G1726139 NA non-coding upstream 129188 30495125 ~ 30495592 (+)
G1725817 LOC107575789 non-coding upstream 213164 30411269 ~ 30411616 (+)
G1725840 NA non-coding upstream 327198 30296813 ~ 30297582 (+)
G1726310 NA non-coding downstream 10234 30635214 ~ 30635420 (+)
G1726311 NA non-coding downstream 11386 30636366 ~ 30636579 (+)
G1726330 NA non-coding downstream 27470 30652450 ~ 30652811 (+)
G1726343 NA non-coding downstream 40670 30665650 ~ 30666102 (+)
G1726353 NA non-coding downstream 46343 30671323 ~ 30671545 (+)
G1726222 NA other upstream 13419 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 34144 30582002 ~ 30590636 (+)
G1725312 LOC106576088 other upstream 732823 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 1364851 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 1410497 29209169 ~ 29214283 (+)
LOC110500226 LOC106576059 other downstream 256863 30881776 ~ 30889293 (+)
G1726863 NA other downstream 515617 31140597 ~ 31141090 (+)
G1727146 NA other downstream 824416 31449396 ~ 31450117 (+)
G1727181 NA other downstream 883076 31508056 ~ 31508372 (+)
G1727220 NA other downstream 939155 31564135 ~ 31564594 (+)

Expression


Co-expression Network