G1726310


Basic Information

Item Value
gene id G1726310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30635214 ~ 30635420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1977530
ctcaatcaaacagactccaacctctccacaatggccaagactagagagctgtgtaaggacatcagggctaaattgtagacctgcacaaggctgggatgggctacaggacaataggcaagcagcttggtgagaaggcaacaactgttggcgcaattattagaaaatggaagaagttcaagatgacggtcaatcaccctcggtctgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1977530 True 207 lncRNA 0.49 1 30635214 30635420

Neighbor

gene id symbol gene type direction distance location
LOC110500929 rs3a coding upstream 90048 30544390 ~ 30545166 (+)
LOC110500216 LOC106609220 coding upstream 224933 30264099 ~ 30410281 (+)
LOC110501060 LOC106576074 coding upstream 416438 30169479 ~ 30218776 (+)
LOC110500212 cr3l2 coding upstream 468562 30139073 ~ 30166652 (+)
LOC110500213 LOC106609216 coding upstream 496851 30135626 ~ 30138363 (+)
LOC110500218 tnni1 coding downstream 83160 30718580 ~ 30725274 (+)
LOC110500219 LOC105029072 coding downstream 114590 30750010 ~ 30807982 (+)
LOC110500220 tnnt2 coding downstream 172741 30808161 ~ 30821295 (+)
LOC110500223 LOC106609230 coding downstream 206105 30841525 ~ 30851119 (+)
LOC110500930 LOC106609235 coding downstream 235853 30871273 ~ 30877399 (+)
G1726232 NA non-coding upstream 10234 30624780 ~ 30624980 (+)
G1726221 NA non-coding upstream 30307 30604706 ~ 30604907 (+)
G1726141 NA non-coding upstream 137905 30497077 ~ 30497309 (+)
G1726139 NA non-coding upstream 139622 30495125 ~ 30495592 (+)
G1725817 LOC107575789 non-coding upstream 223598 30411269 ~ 30411616 (+)
G1726311 NA non-coding downstream 946 30636366 ~ 30636579 (+)
G1726330 NA non-coding downstream 17030 30652450 ~ 30652811 (+)
G1726343 NA non-coding downstream 30230 30665650 ~ 30666102 (+)
G1726353 NA non-coding downstream 35903 30671323 ~ 30671545 (+)
G1726524 NA non-coding downstream 227168 30862588 ~ 30862794 (+)
G1726222 NA other upstream 23853 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 44578 30582002 ~ 30590636 (+)
G1725312 LOC106576088 other upstream 743257 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 1375285 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 1420931 29209169 ~ 29214283 (+)
LOC110500226 LOC106576059 other downstream 246423 30881776 ~ 30889293 (+)
G1726863 NA other downstream 505177 31140597 ~ 31141090 (+)
G1727146 NA other downstream 813976 31449396 ~ 31450117 (+)
G1727181 NA other downstream 872636 31508056 ~ 31508372 (+)
G1727220 NA other downstream 928715 31564135 ~ 31564594 (+)

Expression


Co-expression Network