G1726311


Basic Information

Item Value
gene id G1726311
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 30636366 ~ 30636579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1977531
CTGTAAAAGgtggtgagggttttaggtgacaagccaaatttattcagttgcgccttcttcaccacgctgtctgtgtgggtagaccatttcagtttgtccgttatgtgtacaccgaggaacttaaaactttccaccttctccactactgtcccgtcaatgtggatagaggtgtgctccctctgctgtttcctgaagtccacgatcatctcctttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1977531 True 214 lncRNA 0.47 1 30636366 30636579

Neighbor

gene id symbol gene type direction distance location
LOC110500929 rs3a coding upstream 91200 30544390 ~ 30545166 (+)
LOC110500216 LOC106609220 coding upstream 226085 30264099 ~ 30410281 (+)
LOC110501060 LOC106576074 coding upstream 417590 30169479 ~ 30218776 (+)
LOC110500212 cr3l2 coding upstream 469714 30139073 ~ 30166652 (+)
LOC110500213 LOC106609216 coding upstream 498003 30135626 ~ 30138363 (+)
LOC110500218 tnni1 coding downstream 82001 30718580 ~ 30725274 (+)
LOC110500219 LOC105029072 coding downstream 113431 30750010 ~ 30807982 (+)
LOC110500220 tnnt2 coding downstream 171582 30808161 ~ 30821295 (+)
LOC110500223 LOC106609230 coding downstream 204946 30841525 ~ 30851119 (+)
LOC110500930 LOC106609235 coding downstream 234694 30871273 ~ 30877399 (+)
G1726310 NA non-coding upstream 946 30635214 ~ 30635420 (+)
G1726232 NA non-coding upstream 11386 30624780 ~ 30624980 (+)
G1726221 NA non-coding upstream 31459 30604706 ~ 30604907 (+)
G1726141 NA non-coding upstream 139057 30497077 ~ 30497309 (+)
G1726139 NA non-coding upstream 140774 30495125 ~ 30495592 (+)
G1726330 NA non-coding downstream 15871 30652450 ~ 30652811 (+)
G1726343 NA non-coding downstream 29071 30665650 ~ 30666102 (+)
G1726353 NA non-coding downstream 34744 30671323 ~ 30671545 (+)
G1726524 NA non-coding downstream 226009 30862588 ~ 30862794 (+)
G1726553 NA non-coding downstream 307287 30943866 ~ 30944191 (+)
G1726222 NA other upstream 25005 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 45730 30582002 ~ 30590636 (+)
G1725312 LOC106576088 other upstream 744409 29890286 ~ 29891957 (+)
G1724262 LOC106609200 other upstream 1376437 29256778 ~ 29259929 (+)
G1724234 LOC106609199 other upstream 1422083 29209169 ~ 29214283 (+)
LOC110500226 LOC106576059 other downstream 245264 30881776 ~ 30889293 (+)
G1726863 NA other downstream 504018 31140597 ~ 31141090 (+)
G1727146 NA other downstream 812817 31449396 ~ 31450117 (+)
G1727181 NA other downstream 871477 31508056 ~ 31508372 (+)
G1727220 NA other downstream 927556 31564135 ~ 31564594 (+)

Expression


Co-expression Network