Gene
RNA
| Item | Value |
|---|---|
| gene id | G1726353 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 30671323 ~ 30671545 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1977575 | True | 223 | lncRNA | 0.37 | 1 | 30671323 | 30671545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500929 | rs3a | coding | upstream | 126157 | 30544390 ~ 30545166 (+) |
| LOC110500216 | LOC106609220 | coding | upstream | 261042 | 30264099 ~ 30410281 (+) |
| LOC110501060 | LOC106576074 | coding | upstream | 452547 | 30169479 ~ 30218776 (+) |
| LOC110500212 | cr3l2 | coding | upstream | 504671 | 30139073 ~ 30166652 (+) |
| LOC110500213 | LOC106609216 | coding | upstream | 532960 | 30135626 ~ 30138363 (+) |
| LOC110500218 | tnni1 | coding | downstream | 47035 | 30718580 ~ 30725274 (+) |
| LOC110500219 | LOC105029072 | coding | downstream | 78465 | 30750010 ~ 30807982 (+) |
| LOC110500220 | tnnt2 | coding | downstream | 136616 | 30808161 ~ 30821295 (+) |
| LOC110500223 | LOC106609230 | coding | downstream | 169980 | 30841525 ~ 30851119 (+) |
| LOC110500930 | LOC106609235 | coding | downstream | 199728 | 30871273 ~ 30877399 (+) |
| G1726343 | NA | non-coding | upstream | 5221 | 30665650 ~ 30666102 (+) |
| G1726330 | NA | non-coding | upstream | 18512 | 30652450 ~ 30652811 (+) |
| G1726311 | NA | non-coding | upstream | 34744 | 30636366 ~ 30636579 (+) |
| G1726310 | NA | non-coding | upstream | 35903 | 30635214 ~ 30635420 (+) |
| G1726232 | NA | non-coding | upstream | 46343 | 30624780 ~ 30624980 (+) |
| G1726524 | NA | non-coding | downstream | 191043 | 30862588 ~ 30862794 (+) |
| G1726553 | NA | non-coding | downstream | 272321 | 30943866 ~ 30944191 (+) |
| G1726569 | NA | non-coding | downstream | 329675 | 31001220 ~ 31001757 (+) |
| G1726578 | NA | non-coding | downstream | 338035 | 31009580 ~ 31009866 (+) |
| G1726587 | NA | non-coding | downstream | 349425 | 31020970 ~ 31021218 (+) |
| G1726222 | NA | other | upstream | 59962 | 30605300 ~ 30611361 (+) |
| G1726209 | LOC106609221 | other | upstream | 80687 | 30582002 ~ 30590636 (+) |
| G1725312 | LOC106576088 | other | upstream | 779366 | 29890286 ~ 29891957 (+) |
| G1724262 | LOC106609200 | other | upstream | 1411394 | 29256778 ~ 29259929 (+) |
| G1724234 | LOC106609199 | other | upstream | 1457040 | 29209169 ~ 29214283 (+) |
| LOC110500226 | LOC106576059 | other | downstream | 210298 | 30881776 ~ 30889293 (+) |
| G1726863 | NA | other | downstream | 469052 | 31140597 ~ 31141090 (+) |
| G1727146 | NA | other | downstream | 777851 | 31449396 ~ 31450117 (+) |
| G1727181 | NA | other | downstream | 836511 | 31508056 ~ 31508372 (+) |
| G1727220 | NA | other | downstream | 892590 | 31564135 ~ 31564594 (+) |
