Gene
RNA
| Item | Value |
|---|---|
| gene id | G1726840 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 31116255 ~ 31116553 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1978118 | True | 299 | lncRNA | 0.48 | 1 | 31116255 | 31116553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-ugc-149 | NA | coding | upstream | 12043 | 31104142 ~ 31104212 (+) |
| LOC110500235 | LOC106609242 | coding | upstream | 50604 | 31046030 ~ 31065651 (+) |
| LOC110500233 | LOC106609239 | coding | upstream | 118305 | 30990205 ~ 30997950 (+) |
| LOC110500229 | LOC106609237 | coding | upstream | 133506 | 30942609 ~ 30982749 (+) |
| LOC110500231 | ahcyl2 | coding | upstream | 175759 | 30896004 ~ 30940496 (+) |
| LOC110500239 | LOC106609244 | coding | downstream | 311274 | 31427827 ~ 31436839 (+) |
| LOC118942919 | NA | coding | downstream | 347699 | 31464252 ~ 31465847 (+) |
| LOC110500240 | LOC106609248 | coding | downstream | 376909 | 31493462 ~ 31497830 (+) |
| tmem168a | LOC106609249 | coding | downstream | 451842 | 31568395 ~ 31589029 (+) |
| LOC110500245 | LOC106609252 | coding | downstream | 564387 | 31680940 ~ 31684896 (+) |
| G1726797 | NA | non-coding | upstream | 39411 | 31076628 ~ 31076844 (+) |
| G1726597 | NA | non-coding | upstream | 80020 | 31035810 ~ 31036235 (+) |
| G1726589 | NA | non-coding | upstream | 90742 | 31025201 ~ 31025513 (+) |
| G1726587 | NA | non-coding | upstream | 95037 | 31020970 ~ 31021218 (+) |
| G1726578 | NA | non-coding | upstream | 106389 | 31009580 ~ 31009866 (+) |
| G1726945 | NA | non-coding | downstream | 112428 | 31228981 ~ 31229201 (+) |
| G1726957 | LOC106609243 | non-coding | downstream | 131544 | 31248097 ~ 31250779 (+) |
| G1727049 | NA | non-coding | downstream | 167282 | 31283835 ~ 31284089 (+) |
| G1727050 | NA | non-coding | downstream | 167540 | 31284093 ~ 31284504 (+) |
| G1727055 | NA | non-coding | downstream | 171424 | 31287977 ~ 31288180 (+) |
| LOC110500226 | LOC106576059 | other | upstream | 232642 | 30881776 ~ 30889293 (+) |
| G1726222 | NA | other | upstream | 504894 | 30605300 ~ 30611361 (+) |
| G1726209 | LOC106609221 | other | upstream | 525619 | 30582002 ~ 30590636 (+) |
| G1725312 | LOC106576088 | other | upstream | 1224298 | 29890286 ~ 29891957 (+) |
| G1724262 | LOC106609200 | other | upstream | 1856326 | 29256778 ~ 29259929 (+) |
| G1726863 | NA | other | downstream | 24044 | 31140597 ~ 31141090 (+) |
| G1727146 | NA | other | downstream | 332843 | 31449396 ~ 31450117 (+) |
| G1727181 | NA | other | downstream | 391503 | 31508056 ~ 31508372 (+) |
| G1727220 | NA | other | downstream | 447582 | 31564135 ~ 31564594 (+) |
| LOC110501063 | LOC106609150 | other | downstream | 998183 | 32114413 ~ 32144886 (+) |
