G1727084


Basic Information

Item Value
gene id G1727084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31320279 ~ 31320880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978370
CCTGTAAGCTGGCGTTTAAAGCAGCTCCATAGCCCAGGCTGGAGGGAAGGTTCTTCACAAGCGTCGGGCTTCTACACCCTGTTATCTTCTGAGACCTGCGTTTCTGGTACTCCATCTCATCCACCGTCCACACGGCCCCCTTCACGTTCTCCACGCGCACAAAGCACTTGTGCAGACTGAGGTTGTGGCGAACGGCGTTCT

Function

NR:

description
PREDICTED: forkhead box protein P2 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978370 True 201 lncRNA 0.56 2 31320279 31320880

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-149 NA coding upstream 216067 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 254628 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 322329 30990205 ~ 30997950 (+)
LOC110500229 LOC106609237 coding upstream 337530 30942609 ~ 30982749 (+)
LOC110500231 ahcyl2 coding upstream 379783 30896004 ~ 30940496 (+)
LOC110500239 LOC106609244 coding downstream 106947 31427827 ~ 31436839 (+)
LOC118942919 NA coding downstream 143372 31464252 ~ 31465847 (+)
LOC110500240 LOC106609248 coding downstream 172582 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 247515 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 360060 31680940 ~ 31684896 (+)
G1727055 NA non-coding upstream 32099 31287977 ~ 31288180 (+)
G1727050 NA non-coding upstream 35775 31284093 ~ 31284504 (+)
G1727049 NA non-coding upstream 36190 31283835 ~ 31284089 (+)
G1726957 LOC106609243 non-coding upstream 69500 31248097 ~ 31250779 (+)
G1726945 NA non-coding upstream 91078 31228981 ~ 31229201 (+)
G1727143 NA non-coding downstream 126969 31447849 ~ 31448075 (+)
G1727147 NA non-coding downstream 135289 31456169 ~ 31456407 (+)
G1727148 NA non-coding downstream 136144 31457024 ~ 31463251 (+)
G1727154 NA non-coding downstream 146305 31467185 ~ 31467721 (+)
G1727156 NA non-coding downstream 150639 31471519 ~ 31471810 (+)
G1726863 NA other upstream 179189 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 436666 30881776 ~ 30889293 (+)
G1726222 NA other upstream 708918 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 729643 30582002 ~ 30590636 (+)
G1725312 LOC106576088 other upstream 1428322 29890286 ~ 29891957 (+)
G1727146 NA other downstream 128516 31449396 ~ 31450117 (+)
G1727181 NA other downstream 187176 31508056 ~ 31508372 (+)
G1727220 NA other downstream 243255 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 793856 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 837032 32153116 ~ 32162456 (+)

Expression


Co-expression Network