G1727143


Basic Information

Item Value
gene id G1727143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31447849 ~ 31448075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978429
taccctctccactactgttccatccatgtggataggggggtgtaccctctgctgtttcctgaagtccacaatcatctccttagttttgttgacgttgagtgtgaggttattttcctgacaccacactccgagggccctcacctcctccctgtaggctgtctcgtcgttgttggtaatcaagcctaccactgttgtgtcgtccgcaaacttgatgattgagttggagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978429 True 227 lncRNA 0.51 1 31447849 31448075

Neighbor

gene id symbol gene type direction distance location
LOC110500239 LOC106609244 coding upstream 11010 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 343637 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 382198 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 449899 30990205 ~ 30997950 (+)
LOC110500229 LOC106609237 coding upstream 465100 30942609 ~ 30982749 (+)
LOC118942919 NA coding downstream 16177 31464252 ~ 31465847 (+)
LOC110500240 LOC106609248 coding downstream 45387 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 120320 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 232865 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 237332 31685407 ~ 31736831 (+)
G1727084 NA non-coding upstream 126969 31320279 ~ 31320880 (+)
G1727055 NA non-coding upstream 159669 31287977 ~ 31288180 (+)
G1727050 NA non-coding upstream 163345 31284093 ~ 31284504 (+)
G1727049 NA non-coding upstream 163760 31283835 ~ 31284089 (+)
G1726957 LOC106609243 non-coding upstream 197070 31248097 ~ 31250779 (+)
G1727147 NA non-coding downstream 8094 31456169 ~ 31456407 (+)
G1727148 NA non-coding downstream 8949 31457024 ~ 31463251 (+)
G1727154 NA non-coding downstream 19110 31467185 ~ 31467721 (+)
G1727156 NA non-coding downstream 23444 31471519 ~ 31471810 (+)
G1727158 NA non-coding downstream 25820 31473895 ~ 31474128 (+)
G1726863 NA other upstream 306759 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 564236 30881776 ~ 30889293 (+)
G1726222 NA other upstream 836488 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 857213 30582002 ~ 30590636 (+)
G1725312 LOC106576088 other upstream 1555892 29890286 ~ 29891957 (+)
G1727146 NA other downstream 1321 31449396 ~ 31450117 (+)
G1727181 NA other downstream 59981 31508056 ~ 31508372 (+)
G1727220 NA other downstream 116060 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 666661 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 709837 32153116 ~ 32162456 (+)

Expression


Co-expression Network