G1727146


Basic Information

Item Value
gene id G1727146
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31449396 ~ 31450117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978432
cttatatgcgtcgcggaagttagagtaacaatgatccaaggtttttccacccctggttgcgcaatcgatatgctgataaaatttagggagtcttgttttcagattagccttgttaaaatccccagctacaatgaatgcagcctccggataaatggattccagtttgcaaagagtcaaataaagttcgttcagagccatcgatgtgtctgcttgggggggatatatacggctgtgattataatcgaagagaattctcttggtagataatgcggtctacatttgattgtgaggaattctaaatcgggtgaacagaaggatttgagttcctgtatgtttctttcatcacaccatgtctcgttagccataaggcatacgcccccgcccctcttcttaccagaaagatgtttgtttctgtcggcgcgatgcgtggagaaacccgctggctgcaccgcctccgatagcgtctctccagtgagccatgtttccgtgaagcaaagaacgttacagtctctgatgtccctctggaatgctacccttgctcggatttcatcaaccttgttgtcaagagactggacattggcgagaagaatgctagggagtggtgcacgatgtgcccgtctccggagtctgaccagaagaccgcctcatTTCCCTCTTTTTAGGAGTcgttttttgggtcgctgcatgggatccattccgttgtcctgggtgaaaggcagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978432 True 722 TUCP 0.48 1 31449396 31450117

Neighbor

gene id symbol gene type direction distance location
LOC110500239 LOC106609244 coding upstream 12557 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 345184 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 383745 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 451446 30990205 ~ 30997950 (+)
LOC110500229 LOC106609237 coding upstream 466647 30942609 ~ 30982749 (+)
LOC118942919 NA coding downstream 14135 31464252 ~ 31465847 (+)
LOC110500240 LOC106609248 coding downstream 43345 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 118278 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 230823 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 235290 31685407 ~ 31736831 (+)
G1727143 NA non-coding upstream 1321 31447849 ~ 31448075 (+)
G1727084 NA non-coding upstream 128516 31320279 ~ 31320880 (+)
G1727055 NA non-coding upstream 161216 31287977 ~ 31288180 (+)
G1727050 NA non-coding upstream 164892 31284093 ~ 31284504 (+)
G1727049 NA non-coding upstream 165307 31283835 ~ 31284089 (+)
G1727147 NA non-coding downstream 6052 31456169 ~ 31456407 (+)
G1727148 NA non-coding downstream 6907 31457024 ~ 31463251 (+)
G1727154 NA non-coding downstream 17068 31467185 ~ 31467721 (+)
G1727156 NA non-coding downstream 21402 31471519 ~ 31471810 (+)
G1727158 NA non-coding downstream 23778 31473895 ~ 31474128 (+)
G1726863 NA other upstream 308306 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 565783 30881776 ~ 30889293 (+)
G1726222 NA other upstream 838035 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 858760 30582002 ~ 30590636 (+)
G1725312 LOC106576088 other upstream 1557439 29890286 ~ 29891957 (+)
G1727181 NA other downstream 57939 31508056 ~ 31508372 (+)
G1727220 NA other downstream 114018 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 664619 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 707795 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1871336 33321453 ~ 33321761 (+)

Expression


Co-expression Network