G1727147


Basic Information

Item Value
gene id G1727147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31456169 ~ 31456407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978433
gagtagtaagacatgaataaaagcaacagataccattaataagaaggggctagaagcatcttatatggtgagctaccgagtggctaggacaggcaagccccatactattgtggaggacttaattcttcctgctactgcggatatggctgggacaatgctgggggaaaaggcccaaaaaactatacagacaatgtcttcatcaaacaacactgtttcacgacgcatcagtgacatggcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978433 True 239 lncRNA 0.45 1 31456169 31456407

Neighbor

gene id symbol gene type direction distance location
LOC110500239 LOC106609244 coding upstream 19330 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 351957 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 390518 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 458219 30990205 ~ 30997950 (+)
LOC110500229 LOC106609237 coding upstream 473420 30942609 ~ 30982749 (+)
LOC118942919 NA coding downstream 7845 31464252 ~ 31465847 (+)
LOC110500240 LOC106609248 coding downstream 37055 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 111988 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 224533 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 229000 31685407 ~ 31736831 (+)
G1727143 NA non-coding upstream 8094 31447849 ~ 31448075 (+)
G1727084 NA non-coding upstream 135289 31320279 ~ 31320880 (+)
G1727055 NA non-coding upstream 167989 31287977 ~ 31288180 (+)
G1727050 NA non-coding upstream 171665 31284093 ~ 31284504 (+)
G1727049 NA non-coding upstream 172080 31283835 ~ 31284089 (+)
G1727148 NA non-coding downstream 617 31457024 ~ 31463251 (+)
G1727154 NA non-coding downstream 10778 31467185 ~ 31467721 (+)
G1727156 NA non-coding downstream 15112 31471519 ~ 31471810 (+)
G1727158 NA non-coding downstream 17488 31473895 ~ 31474128 (+)
G1727165 NA non-coding downstream 25596 31482003 ~ 31482283 (+)
G1727146 NA other upstream 6052 31449396 ~ 31450117 (+)
G1726863 NA other upstream 315079 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 572556 30881776 ~ 30889293 (+)
G1726222 NA other upstream 844808 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 865533 30582002 ~ 30590636 (+)
G1727181 NA other downstream 51649 31508056 ~ 31508372 (+)
G1727220 NA other downstream 107728 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 658329 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 701505 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1865046 33321453 ~ 33321761 (+)

Expression


Co-expression Network