G1727148


Basic Information

Item Value
gene id G1727148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31457024 ~ 31463251 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978434
gtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcagaccaaaccatgatgctgccaccaccatgtttgacagtggggatgctgtgttgcttttacgccaaacagaacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978434 True 273 lncRNA 0.45 2 31457024 31463251

Neighbor

gene id symbol gene type direction distance location
LOC110500239 LOC106609244 coding upstream 20185 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 352812 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 391373 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 459074 30990205 ~ 30997950 (+)
LOC110500229 LOC106609237 coding upstream 474275 30942609 ~ 30982749 (+)
LOC118942919 NA coding downstream 1001 31464252 ~ 31465847 (+)
LOC110500240 LOC106609248 coding downstream 30211 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 105144 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 217689 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 222156 31685407 ~ 31736831 (+)
G1727147 NA non-coding upstream 617 31456169 ~ 31456407 (+)
G1727143 NA non-coding upstream 8949 31447849 ~ 31448075 (+)
G1727084 NA non-coding upstream 136144 31320279 ~ 31320880 (+)
G1727055 NA non-coding upstream 168844 31287977 ~ 31288180 (+)
G1727050 NA non-coding upstream 172520 31284093 ~ 31284504 (+)
G1727154 NA non-coding downstream 3934 31467185 ~ 31467721 (+)
G1727156 NA non-coding downstream 8268 31471519 ~ 31471810 (+)
G1727158 NA non-coding downstream 10644 31473895 ~ 31474128 (+)
G1727165 NA non-coding downstream 18752 31482003 ~ 31482283 (+)
G1727138 NA non-coding downstream 28265 31491516 ~ 31492308 (+)
G1727146 NA other upstream 6907 31449396 ~ 31450117 (+)
G1726863 NA other upstream 315934 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 573411 30881776 ~ 30889293 (+)
G1726222 NA other upstream 845663 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 866388 30582002 ~ 30590636 (+)
G1727181 NA other downstream 44805 31508056 ~ 31508372 (+)
G1727220 NA other downstream 100884 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 651485 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 694661 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1858202 33321453 ~ 33321761 (+)

Expression


Co-expression Network