G1727156


Basic Information

Item Value
gene id G1727156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31471519 ~ 31471810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978443
acttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagacccacatcaaacatctccaatccaaagttaaatctagaattggcttcctatttcgcaacaaagcatccttcactcatgctgccaaacatacccttgtaaaactgaccatcctaccaatcctcgacttcggcgatgtcatttacaaaatagcctccaataccctactcaacaaattggatgcagtctatcacagtgccatccgtctTGTCACtaaagcctcatatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978443 True 292 lncRNA 0.42 1 31471519 31471810

Neighbor

gene id symbol gene type direction distance location
LOC118942919 NA coding upstream 5672 31464252 ~ 31465847 (+)
LOC110500239 LOC106609244 coding upstream 34680 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 367307 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 405868 31046030 ~ 31065651 (+)
LOC110500233 LOC106609239 coding upstream 473569 30990205 ~ 30997950 (+)
LOC110500240 LOC106609248 coding downstream 21652 31493462 ~ 31497830 (+)
tmem168a LOC106609249 coding downstream 96585 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 209130 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 213597 31685407 ~ 31736831 (+)
LOC110500247 LOC106609254 coding downstream 273963 31745773 ~ 31800121 (+)
G1727154 NA non-coding upstream 3798 31467185 ~ 31467721 (+)
G1727148 NA non-coding upstream 8268 31457024 ~ 31463251 (+)
G1727147 NA non-coding upstream 15112 31456169 ~ 31456407 (+)
G1727143 NA non-coding upstream 23444 31447849 ~ 31448075 (+)
G1727084 NA non-coding upstream 150639 31320279 ~ 31320880 (+)
G1727158 NA non-coding downstream 2085 31473895 ~ 31474128 (+)
G1727165 NA non-coding downstream 10193 31482003 ~ 31482283 (+)
G1727138 NA non-coding downstream 19706 31491516 ~ 31492308 (+)
G1727141 NA non-coding downstream 28193 31500003 ~ 31500317 (+)
G1727176 NA non-coding downstream 30168 31501978 ~ 31502194 (+)
G1727146 NA other upstream 21402 31449396 ~ 31450117 (+)
G1726863 NA other upstream 330429 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 587906 30881776 ~ 30889293 (+)
G1726222 NA other upstream 860158 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 880883 30582002 ~ 30590636 (+)
G1727181 NA other downstream 36246 31508056 ~ 31508372 (+)
G1727220 NA other downstream 92325 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 642926 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 686102 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1849643 33321453 ~ 33321761 (+)

Expression


Co-expression Network