Gene
RNA
| Item | Value |
|---|---|
| gene id | G1727138 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 31491516 ~ 31492308 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| small integral membrane protein 30-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1978424 | True | 793 | lncRNA | 0.45 | 1 | 31491516 | 31492308 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942919 | NA | coding | upstream | 25669 | 31464252 ~ 31465847 (+) |
| LOC110500239 | LOC106609244 | coding | upstream | 54677 | 31427827 ~ 31436839 (+) |
| trnaa-ugc-149 | NA | coding | upstream | 387304 | 31104142 ~ 31104212 (+) |
| LOC110500235 | LOC106609242 | coding | upstream | 425865 | 31046030 ~ 31065651 (+) |
| LOC110500233 | LOC106609239 | coding | upstream | 493566 | 30990205 ~ 30997950 (+) |
| LOC110500240 | LOC106609248 | coding | downstream | 1154 | 31493462 ~ 31497830 (+) |
| tmem168a | LOC106609249 | coding | downstream | 76087 | 31568395 ~ 31589029 (+) |
| LOC110500245 | LOC106609252 | coding | downstream | 188632 | 31680940 ~ 31684896 (+) |
| LOC110500244 | LOC106609251 | coding | downstream | 193099 | 31685407 ~ 31736831 (+) |
| LOC110500247 | LOC106609254 | coding | downstream | 253465 | 31745773 ~ 31800121 (+) |
| G1727165 | NA | non-coding | upstream | 9233 | 31482003 ~ 31482283 (+) |
| G1727158 | NA | non-coding | upstream | 17388 | 31473895 ~ 31474128 (+) |
| G1727156 | NA | non-coding | upstream | 19706 | 31471519 ~ 31471810 (+) |
| G1727154 | NA | non-coding | upstream | 23795 | 31467185 ~ 31467721 (+) |
| G1727148 | NA | non-coding | upstream | 28265 | 31457024 ~ 31463251 (+) |
| G1727141 | NA | non-coding | downstream | 7695 | 31500003 ~ 31500317 (+) |
| G1727176 | NA | non-coding | downstream | 9670 | 31501978 ~ 31502194 (+) |
| G1727182 | NA | non-coding | downstream | 16210 | 31508518 ~ 31508749 (+) |
| G1727184 | NA | non-coding | downstream | 20399 | 31512707 ~ 31512922 (+) |
| G1727195 | NA | non-coding | downstream | 31104 | 31523412 ~ 31523653 (+) |
| G1727146 | NA | other | upstream | 41399 | 31449396 ~ 31450117 (+) |
| G1726863 | NA | other | upstream | 350426 | 31140597 ~ 31141090 (+) |
| LOC110500226 | LOC106576059 | other | upstream | 607903 | 30881776 ~ 30889293 (+) |
| G1726222 | NA | other | upstream | 880155 | 30605300 ~ 30611361 (+) |
| G1726209 | LOC106609221 | other | upstream | 900880 | 30582002 ~ 30590636 (+) |
| G1727181 | NA | other | downstream | 15748 | 31508056 ~ 31508372 (+) |
| G1727220 | NA | other | downstream | 71827 | 31564135 ~ 31564594 (+) |
| LOC110501063 | LOC106609150 | other | downstream | 622428 | 32114413 ~ 32144886 (+) |
| LOC110500252 | LOC106609149 | other | downstream | 665604 | 32153116 ~ 32162456 (+) |
| G1729465 | NA | other | downstream | 1829145 | 33321453 ~ 33321761 (+) |
