G1727181


Basic Information

Item Value
gene id G1727181
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31508056 ~ 31508372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978468
gatatgttccgtattgcgtcagacaacaacattgacgaatacgctgattcggtgtgcgagttcattagaacgtgcgttgaagatgtcgttcccatagcaacgattaaaacattcccaaaccagaaaccgtggattgatggcagcattcgcatgaaactgaaagcgcgaaccactgcttttaatcagggcaaggtgaccgaatacaaacagtgtagctattccctctgcaaggcaatcaaacaagctaagcgtcagtatagagacaaagtagaatctcaattcaacggctcagacacaagaggtatgtggcattgtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978468 True 317 TUCP 0.44 1 31508056 31508372

Neighbor

gene id symbol gene type direction distance location
LOC110500240 LOC106609248 coding upstream 10226 31493462 ~ 31497830 (+)
LOC118942919 NA coding upstream 42209 31464252 ~ 31465847 (+)
LOC110500239 LOC106609244 coding upstream 71217 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 403844 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 442405 31046030 ~ 31065651 (+)
tmem168a LOC106609249 coding downstream 60023 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 172568 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 177035 31685407 ~ 31736831 (+)
LOC110500247 LOC106609254 coding downstream 237401 31745773 ~ 31800121 (+)
LOC110500249 timp3 coding downstream 365176 31873548 ~ 31894544 (+)
G1727176 NA non-coding upstream 5862 31501978 ~ 31502194 (+)
G1727141 NA non-coding upstream 7739 31500003 ~ 31500317 (+)
G1727138 NA non-coding upstream 15748 31491516 ~ 31492308 (+)
G1727165 NA non-coding upstream 25773 31482003 ~ 31482283 (+)
G1727158 NA non-coding upstream 33928 31473895 ~ 31474128 (+)
G1727182 NA non-coding downstream 146 31508518 ~ 31508749 (+)
G1727184 NA non-coding downstream 4335 31512707 ~ 31512922 (+)
G1727195 NA non-coding downstream 15040 31523412 ~ 31523653 (+)
G1727200 NA non-coding downstream 20110 31528482 ~ 31528710 (+)
G1727203 NA non-coding downstream 23646 31532018 ~ 31532255 (+)
G1727146 NA other upstream 57939 31449396 ~ 31450117 (+)
G1726863 NA other upstream 366966 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 624443 30881776 ~ 30889293 (+)
G1726222 NA other upstream 896695 30605300 ~ 30611361 (+)
G1726209 LOC106609221 other upstream 917420 30582002 ~ 30590636 (+)
G1727220 NA other downstream 55763 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 606364 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 649540 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1813081 33321453 ~ 33321761 (+)
LOC110500285 fam19a5 other downstream 2201720 33709461 ~ 33869016 (+)

Expression


Co-expression Network