G1727204


Basic Information

Item Value
gene id G1727204
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 31533328 ~ 31533589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1978491
ctctacatgaccaaaagtatgcggacacctgctcgtcgaacatctcattccaaaatcatgggcattaatacggagttggccctccccctttgctgctataacagcttccactcctctgggaaggctttccgctagatgttggaacaatgaTGCGggtgttgggtgattaggcctggctcgcagtctgcgttccaattcatcccaaaggtgttcgatggagttgaggtcagggctctgagcaggccagtcaagttcttccaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1978491 True 262 lncRNA 0.52 1 31533328 31533589

Neighbor

gene id symbol gene type direction distance location
LOC110500240 LOC106609248 coding upstream 35498 31493462 ~ 31497830 (+)
LOC118942919 NA coding upstream 67481 31464252 ~ 31465847 (+)
LOC110500239 LOC106609244 coding upstream 96489 31427827 ~ 31436839 (+)
trnaa-ugc-149 NA coding upstream 429116 31104142 ~ 31104212 (+)
LOC110500235 LOC106609242 coding upstream 467677 31046030 ~ 31065651 (+)
tmem168a LOC106609249 coding downstream 34806 31568395 ~ 31589029 (+)
LOC110500245 LOC106609252 coding downstream 147351 31680940 ~ 31684896 (+)
LOC110500244 LOC106609251 coding downstream 151818 31685407 ~ 31736831 (+)
LOC110500247 LOC106609254 coding downstream 212184 31745773 ~ 31800121 (+)
LOC110500249 timp3 coding downstream 339959 31873548 ~ 31894544 (+)
G1727203 NA non-coding upstream 1073 31532018 ~ 31532255 (+)
G1727200 NA non-coding upstream 4618 31528482 ~ 31528710 (+)
G1727195 NA non-coding upstream 9675 31523412 ~ 31523653 (+)
G1727184 NA non-coding upstream 20406 31512707 ~ 31512922 (+)
G1727182 NA non-coding upstream 24579 31508518 ~ 31508749 (+)
G1727215 NA non-coding downstream 18904 31552493 ~ 31552789 (+)
G1727224 NA non-coding downstream 34366 31567955 ~ 31568161 (+)
G1727427 NA non-coding downstream 67202 31600791 ~ 31601136 (+)
G1727468 NA non-coding downstream 124766 31658355 ~ 31658590 (+)
G1727480 NA non-coding downstream 144889 31678478 ~ 31678731 (+)
G1727181 NA other upstream 24956 31508056 ~ 31508372 (+)
G1727146 NA other upstream 83211 31449396 ~ 31450117 (+)
G1726863 NA other upstream 392238 31140597 ~ 31141090 (+)
LOC110500226 LOC106576059 other upstream 649715 30881776 ~ 30889293 (+)
G1726222 NA other upstream 921967 30605300 ~ 30611361 (+)
G1727220 NA other downstream 30546 31564135 ~ 31564594 (+)
LOC110501063 LOC106609150 other downstream 581147 32114413 ~ 32144886 (+)
LOC110500252 LOC106609149 other downstream 624323 32153116 ~ 32162456 (+)
G1729465 NA other downstream 1787864 33321453 ~ 33321761 (+)
LOC110500285 fam19a5 other downstream 2176503 33709461 ~ 33869016 (+)

Expression


Co-expression Network