Gene
RNA
| Item | Value |
|---|---|
| gene id | G1727220 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 31564135 ~ 31564594 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1978507 | True | 460 | TUCP | 0.51 | 1 | 31564135 | 31564594 |
31,562,800
31,563,200
31,563,600
31,564,000
31,564,400
31,564,800
31,565,200
31,565,600
31,566,000
31,566,400
31,566,800
31,567,200
31,567,600
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500240 | LOC106609248 | coding | upstream | 66305 | 31493462 ~ 31497830 (+) |
| LOC118942919 | NA | coding | upstream | 98288 | 31464252 ~ 31465847 (+) |
| LOC110500239 | LOC106609244 | coding | upstream | 127296 | 31427827 ~ 31436839 (+) |
| trnaa-ugc-149 | NA | coding | upstream | 459923 | 31104142 ~ 31104212 (+) |
| LOC110500235 | LOC106609242 | coding | upstream | 498484 | 31046030 ~ 31065651 (+) |
| tmem168a | LOC106609249 | coding | downstream | 3801 | 31568395 ~ 31589029 (+) |
| LOC110500245 | LOC106609252 | coding | downstream | 116346 | 31680940 ~ 31684896 (+) |
| LOC110500244 | LOC106609251 | coding | downstream | 120813 | 31685407 ~ 31736831 (+) |
| LOC110500247 | LOC106609254 | coding | downstream | 181179 | 31745773 ~ 31800121 (+) |
| LOC110500249 | timp3 | coding | downstream | 308954 | 31873548 ~ 31894544 (+) |
| G1727215 | NA | non-coding | upstream | 11346 | 31552493 ~ 31552789 (+) |
| G1727204 | NA | non-coding | upstream | 30546 | 31533328 ~ 31533589 (+) |
| G1727203 | NA | non-coding | upstream | 31880 | 31532018 ~ 31532255 (+) |
| G1727200 | NA | non-coding | upstream | 35425 | 31528482 ~ 31528710 (+) |
| G1727195 | NA | non-coding | upstream | 40482 | 31523412 ~ 31523653 (+) |
| G1727224 | NA | non-coding | downstream | 3361 | 31567955 ~ 31568161 (+) |
| G1727427 | NA | non-coding | downstream | 36197 | 31600791 ~ 31601136 (+) |
| G1727468 | NA | non-coding | downstream | 93761 | 31658355 ~ 31658590 (+) |
| G1727480 | NA | non-coding | downstream | 113884 | 31678478 ~ 31678731 (+) |
| LOC110501063 | LOC106609150 | non-coding | downstream | 578570 | 32114413 ~ 32144886 (+) |
| G1727181 | NA | other | upstream | 55763 | 31508056 ~ 31508372 (+) |
| G1727146 | NA | other | upstream | 114018 | 31449396 ~ 31450117 (+) |
| G1726863 | NA | other | upstream | 423045 | 31140597 ~ 31141090 (+) |
| LOC110500226 | LOC106576059 | other | upstream | 680522 | 30881776 ~ 30889293 (+) |
| G1726222 | NA | other | upstream | 952774 | 30605300 ~ 30611361 (+) |
| LOC110500252 | LOC106609149 | other | downstream | 593318 | 32153116 ~ 32162456 (+) |
| G1729465 | NA | other | downstream | 1756859 | 33321453 ~ 33321761 (+) |
| LOC110500285 | fam19a5 | other | downstream | 2145498 | 33709461 ~ 33869016 (+) |
| G1732028 | NA | other | downstream | 3874695 | 35439289 ~ 35484354 (+) |
