Gene
RNA
| Item | Value |
|---|---|
| gene id | G1728665 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 32167669 ~ 32168934 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proteoglycan 4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1980083 | True | 1242 | TUCP | 0.57 | 2 | 32167669 | 32168934 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500251 | cssa07h12orf66 | coding | downstream | 14634 | 32145223 ~ 32153035 (-) |
| LOC110500250 | LOC106609152 | coding | downstream | 119441 | 32045210 ~ 32048228 (-) |
| LOC110501062 | LOC100286412 | coding | downstream | 185167 | 31952607 ~ 31982502 (-) |
| LOC110500248 | LOC106576044 | coding | downstream | 218887 | 31823691 ~ 31948782 (-) |
| LOC110500243 | LOC106609250 | coding | downstream | 509674 | 31648740 ~ 31657995 (-) |
| LOC110500254 | lkha4 | coding | upstream | 50351 | 32219285 ~ 32229860 (-) |
| LOC110500256 | LOC106609139 | coding | upstream | 67453 | 32236387 ~ 32250579 (-) |
| LOC110500257 | LOC106576032 | coding | upstream | 85936 | 32254847 ~ 32269661 (-) |
| LOC110500260 | LOC106609131 | coding | upstream | 253975 | 32422909 ~ 32449489 (-) |
| LOC110500262 | LOC106609130 | coding | upstream | 289322 | 32458256 ~ 32470648 (-) |
| G1728656 | LOC106609150 | non-coding | downstream | 25113 | 32142266 ~ 32142556 (-) |
| G1728651 | NA | non-coding | downstream | 32111 | 32135302 ~ 32135558 (-) |
| G1727541 | NA | non-coding | downstream | 426314 | 31680931 ~ 31741355 (-) |
| G1727581 | NA | non-coding | downstream | 428967 | 31735710 ~ 31738702 (-) |
| G1727540 | LOC106609252 | non-coding | downstream | 482821 | 31682107 ~ 31684848 (-) |
| G1728697 | NA | non-coding | upstream | 47833 | 32216767 ~ 32217695 (-) |
| G1728706 | NA | non-coding | upstream | 60984 | 32229918 ~ 32230539 (-) |
| G1728708 | NA | non-coding | upstream | 62897 | 32231831 ~ 32232117 (-) |
| G1728709 | NA | non-coding | upstream | 70386 | 32239320 ~ 32239594 (-) |
| G1727426 | LOC107662719 | other | downstream | 568180 | 31599146 ~ 31599489 (-) |
| G1727354 | NA | other | downstream | 675367 | 31491520 ~ 31492302 (-) |
| G1726665 | LOC103371314 | other | downstream | 1234853 | 30929350 ~ 30932816 (-) |
| LOC110500228 | LOC106609233 | other | downstream | 1286277 | 30879517 ~ 30881416 (-) |
| LOC110500206 | LOC106609206 | other | downstream | 2217946 | 29937860 ~ 29952768 (-) |
| LOC110500269 | LOC106609159 | other | upstream | 434529 | 32603262 ~ 32604698 (-) |
| LOC110501068 | LOC106575995 | other | upstream | 2100877 | 34269811 ~ 34288000 (-) |
| G1730761 | NA | other | upstream | 2156291 | 34325225 ~ 34329576 (-) |
| LOC110500290 | LOC106609105 | other | upstream | 2203343 | 34372230 ~ 34376541 (-) |
