G1728051


Basic Information

Item Value
gene id G1728051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 32197519 ~ 32220621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1979404
ACAGATACATGCCAATTCTGAATAGCTGCCAAGCAAAGTAGAGACCGTTATAAAAAGTGGGGGTGCGGCTGGAAGcttctctctagctttctctggTCGTTTTCGGCAACGGGGTGGGGTGTGTGAACCGGTAATAATGCCAGTCTTGGAGTGCTTCTGGTGGGATTCCAATTAGAATCAGGTGCTCTTGTCGTTGTCCACCTTCAGGTCCTTGGACACCAGATTGGCCGTTACCGGGTGCATGGCGGCCCGGTGGGCTATGAACACACGCACCGCCTCCTCA

Function

NR:

description
leukotriene A-4 hydrolase-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1979404 True 283 lncRNA 0.53 2 32197519 32220621

Neighbor

gene id symbol gene type direction distance location
LOC110500253 LOC106609146 coding upstream 16916 32168800 ~ 32180603 (+)
LOC110500252 LOC106609149 coding upstream 35063 32153116 ~ 32162456 (+)
LOC110501063 LOC106609150 coding upstream 52633 32114413 ~ 32144886 (+)
LOC110500249 timp3 coding upstream 302975 31873548 ~ 31894544 (+)
LOC110500247 LOC106609254 coding upstream 397398 31745773 ~ 31800121 (+)
LOC110500255 LOC106609093 coding downstream 10527 32231148 ~ 32234741 (+)
arf4 LOC106609140 coding downstream 30001 32250622 ~ 32254298 (+)
vatf LOC106609141 coding downstream 36859 32257480 ~ 32261475 (+)
LOC110500258 LOC106609138 coding downstream 89422 32310043 ~ 32343558 (+)
LOC110500259 LOC106609137 coding downstream 144899 32365520 ~ 32395907 (+)
G1727480 NA non-coding upstream 518788 31678478 ~ 31678731 (+)
G1727468 NA non-coding upstream 538929 31658355 ~ 31658590 (+)
G1727427 NA non-coding upstream 596383 31600791 ~ 31601136 (+)
G1727224 NA non-coding upstream 629358 31567955 ~ 31568161 (+)
G1728052 LOC106609139 non-coding downstream 15700 32236321 ~ 32239087 (+)
G1728064 NA non-coding downstream 19355 32239976 ~ 32240175 (+)
G1728054 LOC106609139 non-coding downstream 20815 32241436 ~ 32243283 (+)
G1728065 NA non-coding downstream 23391 32244012 ~ 32244301 (+)
G1728066 NA non-coding downstream 24376 32244997 ~ 32245365 (+)
G1727220 NA other upstream 632925 31564135 ~ 31564594 (+)
G1727181 NA other upstream 689147 31508056 ~ 31508372 (+)
G1727146 NA other upstream 747402 31449396 ~ 31450117 (+)
G1729465 NA other downstream 1100832 33321453 ~ 33321761 (+)
LOC110500285 fam19a5 other downstream 1489471 33709461 ~ 33869016 (+)
G1732028 NA other downstream 3218668 35439289 ~ 35484354 (+)
G1732735 NA other downstream 3820710 36041331 ~ 36042488 (+)
LOC110500325 ppp2r5b other downstream 4012501 36189389 ~ 36237829 (+)

Expression


Co-expression Network