Gene
RNA
| Item | Value |
|---|---|
| gene id | G1728064 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 32239976 ~ 32240175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1979419 | True | 200 | lncRNA | 0.33 | 1 | 32239976 | 32240175 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500255 | LOC106609093 | coding | upstream | 5235 | 32231148 ~ 32234741 (+) |
| LOC110501065 | LOC106609145 | coding | upstream | 22182 | 32189542 ~ 32217794 (+) |
| LOC110500253 | LOC106609146 | coding | upstream | 59373 | 32168800 ~ 32180603 (+) |
| LOC110500252 | LOC106609149 | coding | upstream | 77520 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | coding | upstream | 95090 | 32114413 ~ 32144886 (+) |
| arf4 | LOC106609140 | coding | downstream | 10447 | 32250622 ~ 32254298 (+) |
| vatf | LOC106609141 | coding | downstream | 17305 | 32257480 ~ 32261475 (+) |
| LOC110500258 | LOC106609138 | coding | downstream | 69868 | 32310043 ~ 32343558 (+) |
| LOC110500259 | LOC106609137 | coding | downstream | 125345 | 32365520 ~ 32395907 (+) |
| LOC110500261 | irf5 | coding | downstream | 169697 | 32409872 ~ 32420565 (+) |
| G1728052 | LOC106609139 | non-coding | upstream | 889 | 32236321 ~ 32239087 (+) |
| G1728051 | NA | non-coding | upstream | 19355 | 32197519 ~ 32220621 (+) |
| G1727480 | NA | non-coding | upstream | 561245 | 31678478 ~ 31678731 (+) |
| G1727468 | NA | non-coding | upstream | 581386 | 31658355 ~ 31658590 (+) |
| G1728054 | LOC106609139 | non-coding | downstream | 1261 | 32241436 ~ 32243283 (+) |
| G1728065 | NA | non-coding | downstream | 3837 | 32244012 ~ 32244301 (+) |
| G1728066 | NA | non-coding | downstream | 4822 | 32244997 ~ 32245365 (+) |
| G1728072 | NA | non-coding | downstream | 21651 | 32261826 ~ 32266171 (+) |
| G1728073 | NA | non-coding | downstream | 24142 | 32264317 ~ 32314244 (+) |
| G1727220 | NA | other | upstream | 675382 | 31564135 ~ 31564594 (+) |
| G1727181 | NA | other | upstream | 731604 | 31508056 ~ 31508372 (+) |
| G1727146 | NA | other | upstream | 789859 | 31449396 ~ 31450117 (+) |
| G1729465 | NA | other | downstream | 1081278 | 33321453 ~ 33321761 (+) |
| LOC110500285 | fam19a5 | other | downstream | 1469917 | 33709461 ~ 33869016 (+) |
| G1732028 | NA | other | downstream | 3199114 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 3801156 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 3992947 | 36189389 ~ 36237829 (+) |
