Gene
RNA
| Item | Value |
|---|---|
| gene id | G1728073 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 32264317 ~ 32314244 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1979428 | True | 664 | lncRNA | 0.43 | 2 | 32264317 | 32314244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vatf | LOC106609141 | coding | upstream | 2842 | 32257480 ~ 32261475 (+) |
| arf4 | LOC106609140 | coding | upstream | 10019 | 32250622 ~ 32254298 (+) |
| LOC110500255 | LOC106609093 | coding | upstream | 29576 | 32231148 ~ 32234741 (+) |
| LOC110501065 | LOC106609145 | coding | upstream | 46523 | 32189542 ~ 32217794 (+) |
| LOC110500253 | LOC106609146 | coding | upstream | 83714 | 32168800 ~ 32180603 (+) |
| LOC110500259 | LOC106609137 | coding | downstream | 51276 | 32365520 ~ 32395907 (+) |
| LOC110500261 | irf5 | coding | downstream | 95628 | 32409872 ~ 32420565 (+) |
| LOC100135983 | opn1sw | coding | downstream | 141877 | 32456121 ~ 32458130 (+) |
| LOC110500263 | LOC106609128 | coding | downstream | 159737 | 32473981 ~ 32494341 (+) |
| LOC110500266 | LOC106609126 | coding | downstream | 208528 | 32522772 ~ 32531043 (+) |
| G1728066 | NA | non-coding | upstream | 18952 | 32244997 ~ 32245365 (+) |
| G1728065 | NA | non-coding | upstream | 20016 | 32244012 ~ 32244301 (+) |
| G1728054 | LOC106609139 | non-coding | upstream | 21034 | 32241436 ~ 32243283 (+) |
| G1728064 | NA | non-coding | upstream | 24142 | 32239976 ~ 32240175 (+) |
| G1728052 | LOC106609139 | non-coding | upstream | 25230 | 32236321 ~ 32239087 (+) |
| G1728111 | NA | non-coding | downstream | 11354 | 32325598 ~ 32325890 (+) |
| G1728112 | NA | non-coding | downstream | 11790 | 32326034 ~ 32326289 (+) |
| G1728114 | NA | non-coding | downstream | 14538 | 32328782 ~ 32328996 (+) |
| G1728115 | NA | non-coding | downstream | 15050 | 32329294 ~ 32329562 (+) |
| G1728131 | NA | non-coding | downstream | 38382 | 32352626 ~ 32352910 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 101925 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 127621 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 699723 | 31564135 ~ 31564594 (+) |
| G1727181 | NA | other | upstream | 755945 | 31508056 ~ 31508372 (+) |
| G1727146 | NA | other | upstream | 814200 | 31449396 ~ 31450117 (+) |
| G1729465 | NA | other | downstream | 1007209 | 33321453 ~ 33321761 (+) |
| LOC110500285 | fam19a5 | other | downstream | 1395848 | 33709461 ~ 33869016 (+) |
| G1732028 | NA | other | downstream | 3125045 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 3727087 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 3918878 | 36189389 ~ 36237829 (+) |
