Gene
RNA
| Item | Value |
|---|---|
| gene id | G1728265 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 32662049 ~ 32662256 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1979643 | True | 208 | lncRNA | 0.45 | 1 | 32662049 | 32662256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500271 | LOC106576017 | coding | upstream | 25813 | 32613167 ~ 32636236 (+) |
| LOC110500270 | LOC106566433 | coding | upstream | 59157 | 32594388 ~ 32602892 (+) |
| LOC110500268 | LOC106609123 | coding | upstream | 76386 | 32570744 ~ 32585663 (+) |
| LOC110500267 | LOC106576021 | coding | upstream | 93633 | 32560550 ~ 32568416 (+) |
| LOC110500277 | LOC106609118 | coding | downstream | 31961 | 32694217 ~ 32756092 (+) |
| LOC110500276 | LOC106609116 | coding | downstream | 105739 | 32767995 ~ 32792331 (+) |
| LOC110500278 | LOC106609115 | coding | downstream | 130954 | 32793210 ~ 32834958 (+) |
| LOC110500279 | LOC106609114 | coding | downstream | 179533 | 32841789 ~ 32957803 (+) |
| LOC110500281 | trmu | coding | downstream | 388219 | 33050475 ~ 33053507 (+) |
| G1728260 | NA | non-coding | upstream | 6056 | 32655785 ~ 32655993 (+) |
| G1728259 | NA | non-coding | upstream | 6455 | 32655389 ~ 32655594 (+) |
| G1728252 | NA | non-coding | upstream | 17033 | 32644794 ~ 32645016 (+) |
| G1728170 | NA | non-coding | upstream | 166490 | 32494610 ~ 32495559 (+) |
| G1728191 | NA | non-coding | upstream | 193549 | 32465202 ~ 32468500 (+) |
| G1728269 | NA | non-coding | downstream | 5355 | 32667611 ~ 32667979 (+) |
| G1728542 | NA | non-coding | downstream | 470305 | 33132561 ~ 33150958 (+) |
| LOC110500282 | LOC106609111 | non-coding | downstream | 585713 | 33180674 ~ 33253523 (+) |
| G1729333 | NA | non-coding | downstream | 602638 | 33264894 ~ 33265132 (+) |
| G1729338 | NA | non-coding | downstream | 608370 | 33270626 ~ 33270856 (+) |
| LOC110500252 | LOC106609149 | other | upstream | 499657 | 32153116 ~ 32162456 (+) |
| LOC110501063 | LOC106609150 | other | upstream | 525353 | 32114413 ~ 32144886 (+) |
| G1727220 | NA | other | upstream | 1097455 | 31564135 ~ 31564594 (+) |
| G1727181 | NA | other | upstream | 1153677 | 31508056 ~ 31508372 (+) |
| G1727146 | NA | other | upstream | 1211932 | 31449396 ~ 31450117 (+) |
| G1729465 | NA | other | downstream | 659197 | 33321453 ~ 33321761 (+) |
| LOC110500285 | fam19a5 | other | downstream | 1047836 | 33709461 ~ 33869016 (+) |
| G1732028 | NA | other | downstream | 2777033 | 35439289 ~ 35484354 (+) |
| G1732735 | NA | other | downstream | 3379075 | 36041331 ~ 36042488 (+) |
| LOC110500325 | ppp2r5b | other | downstream | 3570866 | 36189389 ~ 36237829 (+) |
